Rhodopseudomonas palustris BisB5: RPD_1032
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Entry
RPD_1032 CDS
T00345
Name
(GenBank) extracellular solute-binding protein, family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPD_1032
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_1032
Transporters [BR:
rpd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RPD_1032
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ABE38270
UniProt:
Q13CB9
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All DBs
Position
1182373..1183398
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AA seq
341 aa
AA seq
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MSRKIISGVVALAVVGTASALVAQPASITIVNPGGPYLEATLEAWGKTFTEKTNIKVKGD
SPQSLPKIQQMVGAKNVSWDVVEVPPVFTMRHCGTLFEKLTPGLVDAARVNAGFGNECGV
PDAGYANIMLYNKTKFAKGGPQNWADFFDVKKFPGKRGLWDGAEGVNLEIALLADGVAPE
NLYPLDLDRAFRKLSELKPHIVFWRTGAQSTQMMESGEVDMIMAWSSRAYPALKNGAPFE
PVWNQHIIYNNVLAIPMGAPNKAASEAYIRHALEDKQQARITELYPVTPALIGAAPKLDE
AGMKVFAGTPERAKTAIRLNLKWVADNSEVIQKRWIEWLNS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaaaatcatatcaggcgtcgtggcgctggcggttgtgggcaccgcgtcggcc
ctcgtcgcgcaaccggcgtcgatcaccatcgtcaatccgggcggcccctatctcgaggcg
acgctggaggcctggggcaagaccttcaccgagaagaccaacatcaaggtgaagggcgac
tccccgcagagcctgccgaagatccagcagatggtcggcgccaagaacgtgtcgtgggat
gtcgtcgaagtgccgccggtgttcacgatgcgccattgcggcacgctgttcgaaaagctc
acgcccggtctcgtcgacgcggcgcgcgtcaatgcgggattcggcaatgaatgcggcgtg
ccggatgcgggctacgccaacatcatgctctacaacaagaccaagttcgcaaagggcggc
ccgcagaactgggccgacttcttcgacgtcaagaagtttcccggcaagcgcggcctgtgg
gacggcgccgagggcgtgaatctcgaaatcgcgctgctggccgacggcgttgctccggag
aacctctatccgctcgacctggatcgcgcgttccgcaagctcagcgaactcaagccgcat
atcgtgttctggcgaaccggcgcgcaatccacccagatgatggaaagcggcgaagtcgac
atgatcatggcgtggtcgtcgcgcgcctatccggcgctgaagaacggcgcgccgttcgag
ccggtgtggaaccagcacatcatctacaacaacgttctggcgattccgatgggcgcgccg
aacaaggccgccagcgaagcctatattcgccatgcgctcgaggacaaacagcaggcccgc
atcaccgagctctatccggtcacgcccgcgctgatcggcgccgctccgaagctcgacgag
gcaggcatgaaagtcttcgccggcacgcctgagcgggccaagaccgcgatccgcctcaat
ctgaaatgggtcgccgacaattccgaagtgatccagaagcgctggatcgagtggttgaac
tcctga
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