Rhodopseudomonas palustris BisB5: RPD_1061
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Entry
RPD_1061 CDS
T00345
Name
(GenBank) transcriptional regulator, NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPD_1061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpd03000
]
RPD_1061
Transcription factors [BR:
rpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
RPD_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
bpMoxR
TIP39
AAA_16
AAA_3
MCM
GAF_3
AAA_30
AAA_7
TIP49
DUF815
HALZ
Motif
Other DBs
NCBI-ProteinID:
ABE38299
UniProt:
Q13C90
LinkDB
All DBs
Position
1215686..1217434
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AA seq
582 aa
AA seq
DB search
MAQREVRLVESEQSRQPMNQNPIPLSEIALTGIFEISKILTAPARLEVTLANVVNLLQSF
LQMRNGVVSLLADDSVPDITVGGGWNEGSDNRYRARLPQKAIDQIVATSVPLVADNVSTH
PMFSAADALALGATDETRVSFIGVPIRIDSRVVGTLTIDRVRDGQSNFRMDADVRFLTMV
ANLIGQTVKLHRVVARDRERLMAESHRLQKELSELKPQRERKRVRVDGIVGESPAIRTLL
AKVSIIAKSQSPVLLRGESGTGKELIAKAIHELSARSNGPFIKINCAALPESVLESELFG
HEKGAFTGAIASRKGRFELADKGTLFLDEIGEISPAFQAKLLRVLQEQEFERVGGNQTIK
VNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDRPSDIPLLATEFLKNFNK
ENDRELAFEPHALELLKACSFPGNVRELENCVRRTATLAAGPAIHDSDFACHQDECLSAI
LWKGHAEPPPERPRPQIPLQVLPRKVPVEVVTPREAFTAPTEPDQTAVRAASNDAAMPER
ERLINAMERSGWVQAKAARLLGLTPRQIGYALKKHDIELKHF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcgcgaagtacgtcttgtcgagagcgagcaatcgcggcagccgatgaaccag
aacccgataccactgagtgagattgcgctcaccggcatcttcgaaatctcgaagatcctc
accgcgccggcgcgcctcgaagtcacgctcgccaatgtggtcaatttgctgcagtccttt
ctgcagatgcgcaacggtgtcgtttcactactggctgacgacagcgttccggacatcacg
gtcgggggcggctggaacgagggcagcgacaaccgctatcgcgcaaggctgccgcaaaaa
gcgatcgaccagatcgtcgcgacctcggttccgcttgtcgccgacaatgtgtccacacat
ccgatgttctctgcagcggacgctcttgcgctcggcgcgaccgacgagacccgcgtgtcg
ttcatcggcgtgccgatccggatcgactcgcgcgtggtcgggacgctgacgatcgaccgg
gttcgcgacgggcagtcgaacttcaggatggacgccgatgtgcgtttcctgaccatggtt
gccaatctgattggccaaaccgtgaaactgcaccgcgtagtggcgcgggatcgcgaacgg
ctgatggcggaaagtcatcgcctgcagaaagaattgtccgagttgaagcctcagcgcgag
cgcaagcgcgttcgcgtcgatggcatcgtcggcgagagtccggcgattcgtacgttgctt
gccaaagtcagcatcatcgccaaatcgcaatcgccggtgctgctgcgcggcgagtcgggc
accggcaaggaactgatcgcaaaggcgatccatgaattgtcagcgcgtagcaacgggccg
ttcatcaagatcaactgcgcggcgcttcccgaatcggtgctcgaatcggaattgttcggg
cacgagaagggcgcgttcaccggtgcgatcgcctcgcgcaagggccggttcgaactcgcc
gacaagggcacgctgttcctcgacgagatcggcgagatctcccccgcatttcaggccaag
ctgctgcgcgttctgcaggagcaggagttcgagcgggtcggcggcaaccagaccatcaag
gtcaacgtccgcatcgttgctgcgaccaaccgcaacctcgaggaagcggtggcgcgcaag
gagtttcgcgccgatttgtattatcgcatcaacgtcgtgccgatgatcctgccgccactg
cgcgacaggccgagcgacattccgttgctggcgaccgagtttctgaagaacttcaacaag
gagaacgatcgcgagctggcgttcgagccgcacgcgctggaattgttgaaggcctgctcg
ttccccggaaacgtccgcgaactcgagaactgcgtgcggcgaacggcgacgctggcggcg
ggaccggccatccacgacagtgatttcgcctgtcaccaggacgagtgcctgtccgcgatc
ctttggaaaggccacgccgagccgccgccggagcggccgcggccacaaatcccgctgcag
gtgttgccgcgcaaggtcccggttgaggtcgtcacgccgcgcgaggcattcactgcgcct
acggagccggaccaaaccgcggtgcgggccgcgtcgaacgacgcagcgatgccggagcgt
gagcgcctgatcaatgcgatggaacgatccggctgggtgcaggcgaaggccgcacgcctc
ctcggactgacgccgcgtcagatcggttacgcgctcaagaagcacgatatcgaactcaag
catttctag
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