Rhodopseudomonas palustris BisB5: RPD_1063
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Entry
RPD_1063 CDS
T00345
Name
(GenBank) nitrogenase cofactor biosynthesis protein NifB
KO
K02585
nitrogen fixation protein NifB
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99982 Energy metabolism
RPD_1063
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Nitro_FeMo-Co
Fer4_12
DUF6779
bCoV_NS8
Motif
Other DBs
NCBI-ProteinID:
ABE38301
UniProt:
Q13C88
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Position
1218030..1219589
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AA seq
519 aa
AA seq
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MQKKLLTLHDFGAPGATSFDELRRSAAQSGCSSTGGSGKSGCGSAAGQGDLPPDVWEKVK
NHPCYSEQAHHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLSPEQAARKVI
AVASTIPQMTVLGVAGPGDPLANPAKTFKTFELVSETAPDIKLCLSTNGLTLPDHVERIV
AMKVDHVTITINMIDPEIGAQIYPWIFYDHRRITGVEASKILSERQLLGLEMLTARGILV
KVNSVMIPGINDRHLIEVNKAVKSRGAFLHNIMPLISAPEHGTVFGLEGRRGPSAQELKA
LQDDCEGEMNMMRHCRQCRADAVGLLGEDRSAEFTTNKVMEMEVTYDLAARQAYQAKVEA
ERDAIAGAKQREMATLADETASIKIQVAIATKGGGVINEHFGHAHEFQIYEVSTAGAKFI
GHRRVDLYCEGGYASDTGIEPILKALNDCAAVLVAKIGLCPKESLAGAGIEAVETYAFDY
IEQSAIAYFKDYLDRVGKSEISHVQRGDADIRQGAFVTS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaacttctcacgctgcacgatttcggcgccccaggtgcgacgtcgttcgat
gaattgcggcgtagcgccgcgcagtccggctgtagcagcacgggtggtagcggaaagtcc
ggctgcggctcggcggcgggccagggcgacctgccgccggacgtctgggagaaggtgaag
aaccatccctgctacagcgagcaggcgcatcaccacttcgcccgcatgcatgtcgccgtc
gcgccggcctgcaacatccagtgcaattactgcaatcgcaagtatgattgcgccaacgaa
tcgcgtccgggtgtcgtcagcgagaagctgtcgccggagcaggcggcccgcaaggtgatc
gccgtcgcctcgacgattccgcagatgaccgtgcttggcgtcgccggcccgggcgatccg
ctcgccaacccggcgaagaccttcaagaccttcgagctggtgtccgagaccgcgcccgac
atcaagctgtgcctgtcgaccaacggcctgacgctgcccgatcacgtcgagcgcatcgtc
gcgatgaaagtcgatcacgtcaccatcacgatcaacatgatcgacccggagatcggcgcg
cagatctatccgtggatcttctacgaccaccgccgcatcaccggcgtcgaggcgtcaaag
atcctcagcgagcggcaattgctcgggctcgagatgctcaccgcgcgcggcatcctggtc
aaggtcaactcggtgatgatcccggggatcaacgatcggcatctgatcgaggtcaacaaa
gcggtgaaatcgcgcggcgccttcctgcacaacatcatgccgctgatctccgcgccggag
cacggcacggtgttcggcctcgaaggccgccgcggcccgtccgcgcaggagctgaaggcg
ctccaggatgattgcgagggcgaaatgaacatgatgcggcattgtcggcaatgccgcgcc
gacgcggtcggcctgctcggtgaggaccgcagcgccgaattcaccaccaacaaggtgatg
gagatggaggtcacatacgatctcgccgcgcgccaagcctatcaggccaaggtcgaggcc
gagcgcgacgccatcgctggcgccaagcagcgcgagatggcgacgctcgccgatgagacc
gcctcgatcaagatccaggtcgcgatcgcgaccaagggcggcggcgtgatcaacgagcac
ttcggccatgctcatgaattccagatctacgaggtctcgaccgccggcgccaagttcatc
ggccaccgccgcgtcgatctgtattgcgagggcggctacgccagcgacaccgggatcgag
ccgattctgaaggcgctgaacgactgcgccgcggtgctggtcgccaagatcggcctctgt
ccgaaggagtcgctggccggcgccggcatcgaggcggtcgagacctatgccttcgactat
atcgagcaatcggcgattgcctatttcaaggactacctcgatcgcgtcggcaagtcggag
atcagtcacgtccagcgtggcgatgccgacattcgccagggcgcattcgtcacgagctga
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