Rhodopseudomonas palustris BisB5: RPD_1443
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Entry
RPD_1443 CDS
T00345
Name
(GenBank) Pyrimidine nucleoside phosphorylase-like
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00240
Pyrimidine metabolism
rpd01100
Metabolic pathways
rpd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RPD_1443
Enzymes [BR:
rpd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
RPD_1443
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Gene cluster
GFIT
Motif
Pfam:
PYNP_C
Glycos_transf_3
Glycos_trans_3N
DUF2254
Motif
Other DBs
NCBI-ProteinID:
ABE38680
UniProt:
Q13B59
LinkDB
All DBs
Position
complement(1611744..1613288)
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AA seq
514 aa
AA seq
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MNASHLSRPPLTIRRISLDTGRENVAVISRRSRALRADVFRGFSRVALRINTKVLLATLM
ITDDDAMIGPDELGLSEPAFRRFNEPVGSAVSVSPAQPPASLDAVRAKIQGHTLTPAEIT
AVIDDVAHFRYSDMEIAAFLISAARFTSTDELLALVDAMASVGTRLKWQNPIVVDKHCIG
GIPGNRTTMIVVPIVAAQGLMIPKTSSRAITSPAGTADTMEVLARVDLDVEQMKRVVTTC
GGCLIWGGHVNLSPADDILISVERPLSLDTPEQMVASIMSKKLAAGSTRLLIDFPVGPSA
KIASASEAMRLRKLFEFVGDHFGIAVEVVTTDGRQPIGRGIGPVLEARDVMAVLGNEPNA
PADLREKSLRLAAHLLEYDPLLRGGAGYARAKELLDSGAALKKMQQIIDAQGPSVCNSEL
GSHAADVLAPADGVVNGIDCLRINRLARTAGAPIVKGAGIDLFKKIGDRVDQGEPIYRIY
ASDRSELDLAIAAAEAESGFSVNHHSPAAVEPVS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcttcccacctgtcccgtccaccgctgacgatccggcggatcagcctcgatacc
ggccgcgaaaatgtcgcggtgatctcgcgccgctcgcgggcgttgcgcgccgacgtcttt
cgtggcttcagccgggtcgcgttgcgcatcaacaccaaggtgctgctggcgacgctgatg
atcaccgacgacgatgcgatgatcggccccgacgaactcggcctgtccgagccggcgttt
cgccgcttcaacgaaccggttggcagcgcggtgagcgtgtcgccggcgcagccgccggcc
agcctcgacgcggtgcgcgccaagatccagggccacacgctgacgcccgcggaaatcacc
gctgtcatcgacgacgtcgcacacttccgctactccgacatggagatcgcggcgttcctg
atctccgccgcacgcttcacctcgaccgatgaattgctggcgctggtcgacgccatggcc
tcggtcggcacccggttgaaatggcagaacccgatcgtggtcgacaagcactgcatcggc
ggcattcccggcaaccggaccaccatgatcgtggtgccgatcgtcgccgcgcaggggctg
atgattcccaagacctcgtcgcgcgcgatcacctcgccggccggcaccgccgacacgatg
gaagtgctggcgcgcgtcgatctcgacgtcgaacagatgaagcgggtggtcaccacttgc
ggcggctgcctgatatggggcggccacgtcaatctgtcgccagccgacgacatcctgatc
tcggtcgaacggccgttgagcctcgacacgccggagcagatggtcgcttcgatcatgtcg
aagaagctcgcggcaggctcgacgcggctcctgatcgattttccggtcgggccgagcgcc
aagatcgcgagcgcttccgaagcgatgcggttgcgcaaactgttcgaattcgtcggcgat
cacttcggcatcgcggtcgaggtggtaaccaccgatggccgacagccgatcggccgtggc
ataggcccggtgctggaagcgcgcgacgtgatggccgtgctcggcaacgagccgaacgcg
ccggcagatctgcgcgaaaaatcgctgcggctcgccgcgcatctgctcgaatacgaccct
ctgctgcggggcggcgccggttacgcacgggcgaaggagctgctcgacagcggcgcggcg
ctgaagaagatgcagcagatcatcgacgctcaggggccgtccgtgtgcaactccgaactc
ggcagccatgccgccgacgtgctcgcgccggccgacggcgtggtcaacggcatcgactgc
ctgcgcatcaaccgcctcgcccgcaccgcgggggcgccgatcgtgaagggcgcgggcatc
gatctgttcaagaagatcggcgaccgcgtcgatcagggagaaccgatctatcgcatctac
gcctccgaccgctccgagctggaccttgcgatcgcggccgcggaagcggagtccggtttc
tcggtcaaccatcactctcccgccgccgtggaaccggtgtcgtga
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