Rhodopseudomonas palustris BisB5: RPD_1569
Help
Entry
RPD_1569 CDS
T00345
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00061
Fatty acid biosynthesis
rpd00071
Fatty acid degradation
rpd01100
Metabolic pathways
rpd01212
Fatty acid metabolism
rpd02024
Quorum sensing
rpd04146
Peroxisome
Module
rpd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPD_1569
00071 Fatty acid degradation
RPD_1569
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPD_1569
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPD_1569
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpd01004
]
RPD_1569
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpd04147
]
RPD_1569
Enzymes [BR:
rpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPD_1569
Lipid biosynthesis proteins [BR:
rpd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPD_1569
Exosome [BR:
rpd04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPD_1569
Exosomal proteins of breast cancer cells
RPD_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_9
SH3_1
Motif
Other DBs
NCBI-ProteinID:
ABE38806
UniProt:
Q13AT3
LinkDB
All DBs
Position
complement(1760994..1762922)
Genome browser
AA seq
642 aa
AA seq
DB search
MIDYAGRVAQADTFPKLLRLNAREFGGEIALREKDLGLWRVFTWADYQTRVHDFTLGMLE
LGLTRGDVIGIIGDNRPDWVAAEIATHAIGAMSLGLYRDVLDEEAAYLLTYGAAKLVFAE
DEEQVDKLLGLADRVPNLQHIVYSDPRGMRKYDDPRLIPADRLAAMGRDRAAREPGLYDR
LVDATQGGDVAILCTTSGTTAHPKLAMLAAGRILKHCATYLSFDPKGPEDEYVSVLPLPW
IMEQVYALGKGLLCRMKVNFVEEPDTMMNDFREIAPTFVLFAPRVWEGLAADVRARVMDA
SPLKQRLYETGMKAGLAALAEGKHSGFADAVLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTELLGAYTLHRPDEVDPDTTGVPMGPEIEIKVENPDVQGIGEIV
VRHPNMYLGYYKNEEASAADMKDGWMQSGDAGYFNAKGQLVVIDRIKDLAETSHGEKFSP
QYIENKLKFSPYVAEAVVLGAGRERLAAMICIRYSIISKWAEKKRIAFTTYSDLSSRPEV
YEMLRSEVESVNATLPAAQRISRFLLLYKELDADDGELTRTRKVRRTVINEKYADIIDGI
YGGKSDIPVDTVIQFQDGTTQRIRTSLKVVDLGLPAHAEAAE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattacgccggccgcgtcgcgcaagccgacacattccccaagctgctgcgtctc
aatgcccgcgagttcggcggcgagatcgccttgcgggaaaaggacctcggcctctggcgc
gtgttcacctgggctgactaccagacccgggtccatgatttcacgctgggcatgctggaa
ctggggctgacccgcggcgacgtcatcggcatcatcggcgacaaccggcccgattgggtg
gcggcggagatcgcgacccacgcgatcggcgcgatgagcctcgggctgtaccgcgacgtg
ctcgacgaggaggccgcctatctgctgacctacggcgcggcaaagctggtgttcgccgag
gacgaagagcaggtcgacaagctgctcggcctcgccgaccgcgtgcccaacctgcagcat
atcgtctattccgatccgcgcggcatgcggaaatacgacgacccgcggctgattccggcc
gaccggctcgccgcgatggggcgcgaccgcgccgcccgcgagccggggctatacgacagg
ctggtcgacgcgacgcaaggcggagacgtcgcgatcctgtgcacgacctcgggcacgacc
gcgcatcccaagctggcgatgctggctgcaggacgcattctgaagcattgcgcgacctat
ctcagcttcgacccgaaggggccggaggacgaatacgtctcggtgctgccgctgccttgg
atcatggagcaggtctacgcgctcggcaaagggctgttgtgccggatgaaggtcaacttc
gtcgaagagcccgacacgatgatgaacgacttccgcgagatcgcgccgaccttcgtgctg
ttcgcgccgcgggtctgggaaggccttgcggcggatgtccgcgcgcgggtgatggacgcc
tcaccgctgaaacagcggctgtacgagaccggcatgaaagcggggctcgccgcattggcg
gagggcaaacattccggcttcgccgacgcggtactgttccgggcgctgcgcgaccggctc
gggttcacgcggctgcgctcggcggcgaccggcggcgcggcgctcggccccgacactttc
aagttcttccgcgcgatgggcgtgccgctgcgcacgctatacggccagaccgaactgctc
ggcgcctacaccttgcataggccggatgaggtcgaccccgacaccaccggtgtgccgatg
ggacccgagatcgagatcaaggtcgagaatcccgacgtccagggcatcggcgaaatcgtg
gtgcgccaccccaacatgtatctcggctactacaagaacgaggaagcctcggccgccgac
atgaaggacggctggatgcaatccggcgacgccggctatttcaacgccaagggccagctc
gtcgtcatcgaccgcatcaaggatctcgccgaaacctcgcacggcgaaaagttctcgccg
caatatatcgagaacaagctgaaattctcgccttacgtcgccgaagccgtggtgctcggc
gccgggcgcgagcggctcgcggcgatgatctgcatccgctactcgatcatttcgaaatgg
gccgagaagaagcggatcgccttcaccacctattcggatctgtcgtcgcgccccgaggtc
tacgagatgctgcgcagcgaggtcgagagcgtcaacgcgacgctgccggccgcgcagcgg
atctcccgcttcctgctgctgtacaaggaactcgacgccgacgacggcgaattgacccgc
acccggaaggtccgccgcacggtgatcaacgagaagtatgccgacatcatcgacggcatc
tacggcggcaagagcgacatcccggtcgacaccgtgatccagttccaggacggcaccacc
cagcgcatccgcacctcgctgaaagtggtcgacctcggcctccccgcccatgcggaggcg
gcggaatga
DBGET
integrated database retrieval system
