Rhodopseudomonas palustris BisB5: RPD_1838
Help
Entry
RPD_1838 CDS
T00345
Name
(GenBank) Amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00330
Arginine and proline metabolism
rpd00360
Phenylalanine metabolism
rpd00380
Tryptophan metabolism
rpd00627
Aminobenzoate degradation
rpd00643
Styrene degradation
rpd01100
Metabolic pathways
rpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RPD_1838
00360 Phenylalanine metabolism
RPD_1838
00380 Tryptophan metabolism
RPD_1838
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
RPD_1838
00643 Styrene degradation
RPD_1838
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
RPD_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
ABE39074
UniProt:
Q13A15
LinkDB
All DBs
Position
complement(2056439..2057872)
Genome browser
AA seq
477 aa
AA seq
DB search
MAAHQELIQATACAIVDRLESGDVTPLDLLDALEQRIAEVDGAVNALPTLCFDRARERAA
ALMKKPKAQRGLLAGLPVPIKDLTAVEGVLTTQGSPIYKDHVPDRSDLMVEQLEANGGVV
YAKSNTPEFGAGANTFNEVFGATRNPWDLSRSAAGSSGGAAVALATGTAWLAHGSDMGGS
LRNPASFCGVVGLRPSFGRVAHTPTAKIDRNLGVQGPMARNVEDVALLLDAMSGEHAADP
LSLPSPATSFLAAARARTKPLRVAYSPDLGITPVDPEVAAITRRAAERFIEAGVTVDEAQ
PDLREAHDCFQVLRAFDFAISKADLLRTQRELLKPEVIWNIEQGLKLSVDELAKAEAQRV
AMAARTIEFFKTYDLLLCPATITAPFPIEQRYLAECNGKTFDNYVEWLGIVYAITLVCCP
ALSLPCGFTATGLPVGLQIIARPRNESGLLAGAAVLEDILGLRGSTPINPRPAPASL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacatcaggagctgattcaggcgacggcttgcgcgatcgtcgacaggctcgag
tccggcgacgtcacgccgctcgacctgctcgacgcgttggagcagcgcatcgccgaagtc
gacggcgccgtcaacgcgctgccgacgctgtgcttcgatcgcgcccgcgaacgtgccgcc
gccttgatgaaaaaaccgaaagcgcagcgcggtctgctggccggcctgcccgtcccgatc
aaggacctcaccgctgtcgaaggcgtgctgaccacgcaaggctcgccgatctacaaagac
catgtgccggaccgctccgacctcatggtcgaacagctcgaagccaatggcggcgtggtc
tatgcgaaatccaacacgccggagttcggcgcaggcgccaacaccttcaacgaggtgttc
ggggcgacgcgcaatccgtgggacctgtcccgctcggccgcaggatcgtccggcggcgct
gcggttgcgctcgcgaccggcaccgcatggctcgcgcacggctccgacatgggcggctcg
ttgcgcaaccccgcgagcttctgcggcgtggtcggactgcgcccgagcttcggccgggtc
gcgcatacgccgacggcgaagatcgatcgcaatctcggcgtgcagggtccgatggcgcgc
aatgtcgaggatgtcgcgctgctgctcgacgcgatgagcggcgagcacgccgcagatccg
ctgtcgctgccctcgccggcgacatcgtttctcgccgccgcgcgcgcgcgcaccaagccg
ctgcgcgtggcctactcgcccgatctcgggatcacaccggtcgatccggaagtcgccgcg
atcacccgcagggcggccgagcgcttcattgaagccggagtcaccgtcgatgaggcccag
cctgatctgcgcgaggcacatgattgcttccaggtgctgcgcgcgttcgacttcgcgatc
agcaaggccgatctgctgcgcacccagcgcgagctgctgaagccggaagtgatctggaac
atcgaacaggggctcaagctcagcgtcgacgagctggcgaaggccgaagcgcagcgcgtg
gcgatggcggcgcgcacgatcgagttcttcaagacctacgatctgctgctgtgccccgcg
acgatcaccgcgccgtttcccatcgagcagcgttacctcgccgaatgcaacggtaagaca
ttcgacaactacgtcgagtggctgggcatcgtctatgcgatcacgctggtgtgctgcccc
gcgctgtcgctgccctgcggcttcaccgcgaccggtctgccggtcgggctgcagatcatc
gcgcggccgcgcaacgaatccggcctgctcgccggcgcagctgtgctcgaggacattctc
ggcctgcgcggctcgacgccgatcaatccgcggcccgcgcctgcaagcctctga
DBGET
integrated database retrieval system