Rhodopseudomonas palustris BisB5: RPD_2126
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Entry
RPD_2126 CDS
T00345
Name
(GenBank) ATPase
Organism
rpd
Rhodopseudomonas palustris BisB5
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
NERD
Pkinase
AAA_30
Viral_helicase1
AAA_19
ResIII
Kdo
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA
NAT10_TcmA_helicase
AAA_25
nSTAND3
DO-GTPase1
ATPase
DAP3
Motif
Other DBs
NCBI-ProteinID:
ABE39361
UniProt:
Q138X8
LinkDB
All DBs
Position
2376912..2381669
Genome browser
AA seq
1585 aa
AA seq
DB search
MEIKFFLPQGPQPTEMAGLEDIRATFPKHWKGYANFVMRQPQRRGQDREIDIVIVTPDRI
ILVDLKHIRGRIENRGGIWHRDADIIGASPAHKIRDNAKVLASLIRSEIHHFPAVPPVES
LVVLTHPQCDPSGLDQVERDRTLKLSDFLKITREQNFRNLFTGPTKYSESNSLCSGQCGN
ALQKFFSNGKLFEPRKTRFHGFMPVGDPAFKHPLFEEFSCHQSEDPNYTGLLRLWDFSVD
GEFIVEEARRPIAERERAVLGHIRVQDPALYENYVLRSLHFDSEYTLRYSEIFDCLPDLE
RLSRYHSVLNDLTFERRTELARLFLDRIASLHRIRVAHRDLDRHSIWIDERRSKVVLSSF
GAAHFPERKSIGGARSKLLAGGYRVPEDVGESQKGTPFQQDVFLAGAVVWNLLVGARLEE
IDGVPVWSSRDLEDVGLPDAFQGWFERCLKINANERYESGVDAADAFAELLRKTEKASLE
RQLDAYRRDIDPISDYEPSDWISKKPYRIYKSLKDNESHFVKSWPERILGERRKSAARLI
EFFGKADALRRIDAKWLPRISVACLCTDGLLLIQDWVDGEKLSACDVSTWTPEGLRRFVV
GLIDAVDELHKLELNHGDISPENILVCFDGDIPRPVLVDVVDFSADDIGRSTPAYCPAED
NDLRSRDRYAVGQIALELAEACTDAETEALLRLGAGKCAEGAAPWLTLKALKDAVVFRRV
APTKIKLDIEIETPRTTFEGAMLSDNGVFHIVKSKRAPDSIEVFGFDQRVTIDFDPKDAK
PVEAIANRIDMGQAAWAQRHRLLSFEGSLKIVRSRSRRFVGLDHLPELVASHLGSEPVIA
KSEAAPKVTDAPDPAAPTTKPATQKFPVEDFWNGTILAEDEISPEFTLAQEPSYDRDERT
LHLIAEDNLPEFESGDGQSISIQWNGYKLGDLDTERSRGTTVVVRNVRNVRGLNKGAVLK
IPDDLVSFQRRSRAVGRILDRKSQIPNLIGFFDPAVDLAPQTFGPEIDDAILSRYGLNPA
QNDAFKHLWRYGPLGLLQGPPGTGKTTFIAAFVHYALTELRLKNVLVLSQSHEAVNAASE
KILQTAAKHGGNIEMLRVGQHSKISPILHNYHAFAIQDRYRELFRAAVKERVLAPLSRLG
LERDYIYAAVEIENSLGSLLKQIEFCEQDIATSRDQDTVAAAHERLEGLNLAWADAVEEH
GVSPELDPRSALEEIRDTLADQYSVHDVDARRRLLRVHGLALEWGATLGMRGRSLEELIA
RSRNLISGTCVGIGRYGIQVDRNVYDLVIIDEAARCTPGELAVGMQSGRRVILVGDHKQL
PPLYGHELIAALGERLNIRSKRELNRSDFERAFHSAYGKAVARTLTSQYRMAPKIGKLVA
ETFYPGQELETERGGAPKYYEYLPRPLDDEMVWIDTGHSKHSRREREAGSSFVNRTEAAV
VISLLKVIAGTKGFVDEALVDLREEEPLVGVICMYAPQVGMIEEMLITSDLSPDFQKLVK
VGTVDSYQGKENRIVILSLVRSNPERNMGFVRAANRINVALSRAMERLIIVGSTGMFERN
GNALAPVIKHLKAGGRVLPSAGVLQ
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaattctttcttccgcagggcccccagccaacggaaatggcagggcttgag
gacattcgcgcaacctttccaaagcattggaaggggtacgcgaatttcgtcatgcgccaa
ccgcagcggcggggccaggaccgcgaaatcgatattgtgatcgtcacaccagatcgcatc
attctcgttgacctcaagcatattcgtgggcgcatcgagaatcgaggaggcatctggcac
cgcgacgcagacattatcggtgcgtcaccagctcataaaatccgcgacaatgccaaagtg
ctcgcgtcgttgataaggtcggagatccaccattttcccgcagtgccgcctgtcgaaagc
cttgtcgtcctcacacatccgcaatgcgatcctagcggtctcgatcaggtcgaacgtgat
cgaacgctcaagctttctgatttcctgaagattacgcgtgaacagaattttcggaacctc
ttcaccggtccaaccaagtactctgagtccaactcgctctgctcggggcaatgtggaaac
gctctccaaaagttcttcagcaacggaaaactctttgagccccggaagacgcgttttcat
ggcttcatgccagttggtgatccggctttcaagcatcctctttttgaagagttttcctgc
catcaatccgaagatccgaactacacgggccttcttcggctgtgggactttagtgtcgat
ggcgaatttatcgttgaagaagcgcgtcgcccgatcgctgagcgggagagagcggttctg
gggcatattcgggttcaagatccagccctctatgagaactatgttctccgctctctccat
ttcgattccgaatacacgctgagatactctgaaatcttcgattgcctgcccgatttagag
cgcctcagccgttaccatagcgtactaaacgatctcacatttgaacgacggactgagctg
gccaggctttttttggatcgcattgcgagtttgcatcgtatccgggtcgctcaccgggat
ttggatcggcattccatctggatcgatgagcgacgcagcaaagtggtgctgtcgagtttc
ggggccgctcattttccagaacgaaagtccatcgggggcgcccgttcaaagctgctggcg
ggtggttatcgagtcccggaggacgttggcgaaagccaaaagggaactccgttccaacag
gatgtgttccttgcaggagcggttgtatggaatcttctggtaggagcccgactggaggag
atagacggtgtgccggtctggagctctcgcgaccttgaggacgttggcttacccgatgca
tttcagggatggtttgagcgttgtttaaagatcaacgcaaacgagcgctatgagagtggc
gtcgatgcggctgacgcgttcgctgagctgcttcggaaaactgaaaaggcatcgctagaa
cggcagttggatgcctatcggcgtgatatcgatcctatatcagactatgagccttcggac
tggataagtaagaaaccttatcgcatctacaaatctttgaaggataatgagagccacttc
gtcaagagttggccagaacgaattctcggtgagcgcagaaaatcggccgcgcgactgatc
gagttcttcggcaaagccgatgcgttacgacggatcgacgccaaatggcttccgcgaata
agcgttgcgtgtctttgcaccgacggtcttctgcttattcaagattgggttgatggggaa
aagctatccgcttgtgacgtctcgacctggacacctgaaggcttgcgtcgcttcgttgtc
gggctgatcgacgccgtcgacgagcttcataagcttgaactgaatcacggcgacatctcg
ccggagaatatccttgtctgcttcgatggggacatcccccgacctgtactagttgatgta
gtcgatttttctgcggatgacatcggacgcagcacccctgcttattgtcccgccgaggac
aatgatttgaggagtcgagaccgatatgccgtcggtcaaattgcgttggagcttgcagaa
gcctgcacggacgcagagacggaagctctgcttcgattgggtgccggcaaatgcgccgaa
ggggccgcaccgtggctcacgctcaaggccctgaaggatgcagtcgtatttcgccgagtg
gcaccaaccaagatcaaactcgatatcgagatcgagactccccgcacaacgttcgaaggc
gcaatgctgtcagacaatggcgtattccacattgtcaagtcgaagagggcgcctgactcg
atcgaagtgttcgggttcgatcaacgcgttacgatcgattttgatccgaaagatgccaag
ccggtagaagcgatcgcgaacagaatcgatatggggcaggcggcgtgggctcaacgacac
cggctcctgtcctttgaggggtcgctcaagatcgtgcgaagcagatcaaggagatttgtc
ggactcgaccatctgcccgaattagtcgcgtcccatctcggttcagagcctgtaatcgca
aagtcggaggctgcgccgaaggtcaccgatgccccagatcctgccgcaccgaccacaaaa
cctgccacacagaagtttccagtcgaggatttctggaacgggactattctggcagaagat
gaaatcagcccggagttcacgcttgcgcaggagccgagttatgaccgcgatgaaaggact
ctgcaccttatagcggaagataacctgccggaatttgagtccggagatggccagtcgatc
agtatacaatggaacgggtataagctcggcgatctagatacggagagatcgcgggggacc
acggtcgtcgtccggaatgtacgtaacgtgcgcgggttgaataaaggggcagtgttaaag
atcccggacgaccttgtcagcttccagcggcggtctcgggcagtgggtcgcattctggat
cgaaaatcgcagatccctaatcttattggatttttcgatccggctgtcgatcttgcgcct
cagacgttcgggcccgaaatcgacgacgcgatcctatcgcgttatggactgaatccagcg
caaaacgacgcgttcaaacatttgtggcgttatggaccgcttgggctccttcagggcccg
ccgggtacaggcaagacgacgttcattgctgcattcgtgcactatgcgttgactgaactc
cggctgaaaaatgtgctggttctttcacaatcccacgaagctgttaacgcggcctccgag
aaaatcctccagacggctgccaagcacggcggcaacatcgagatgctgcgcgtggggcag
cactcgaagatttcgccgatcctccacaattatcacgccttcgcgatccaggatcgatac
cgagaattgtttagagctgcggtgaaggagcgtgttctcgctccgctaagtcggttgggt
ttggaaagggactacatttacgctgctgtcgagatcgagaattcactcggctcgctactt
aagcagatcgagttttgcgaacaggatattgcgacgtcgcgggatcaggacaccgttgcg
gcggcgcatgaacgcctggagggcctgaacctcgcgtgggcagacgctgtggaagagcac
ggcgtctcacctgaattggatccaagaagcgcgcttgaggaaatccgggatacgttggct
gaccagtattccgtccatgacgtcgatgcacggcgcagactcctgcgcgtccacgggtta
gcactggagtggggagcaacgcttggaatgcgagggcggagtttggaagagctcattgca
aggagccgcaatctgatcagcggcacatgtgtgggtattgggcgatacggtatccaagtc
gatcggaatgtgtacgatcttgtgatcatcgacgaggccgcacgctgtaccccaggcgaa
cttgcggttggaatgcagtctggccgacgagtaattctggttggcgaccacaagcaattg
ccgcccctttatggtcatgagctgatcgccgctctcggggaaaggctgaatatccgctcc
aagagggagctgaaccgcagcgacttcgaacgagctttccattcagcctacgggaaggct
gtcgctcgaacgctgacaagccagtatcgaatggcgccgaaaatcggaaagcttgttgct
gagacgttttacccaggccaggagctagaaaccgagcggggtggcgcgccgaagtattac
gagtatctgccgcggccgctcgacgacgaaatggtatggattgatacaggtcactcgaaa
cattccagacgagagagagaggccggaagcagtttcgtcaataggacggaagctgccgta
gtcatttcacttctgaaagtgatcgccggaacgaagggtttcgttgatgaggcgctcgtc
gatcttcgggaagaggagccgctcgttggcgtgatctgcatgtatgctcctcaggtcggt
atgatagaagaaatgttgattacgtcggatttgtcacctgacttccagaagctggttaag
gtcgggacggtcgatagttaccaaggcaaggagaatcgaattgtgatcctgtctctggta
agaagtaatccggagaggaatatgggtttcgtgcgcgcggctaaccgcatcaatgttgca
ctgtctcgagccatggagcgtcttatcatcgtcggaagcacgggcatgttcgaaagaaat
ggaaatgcgcttgctccagtcattaagcacctcaaagcaggcgggagagtgcttccaagt
gcgggtgtgttgcaatga
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