Rhodopseudomonas palustris BisB5: RPD_2227
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Entry
RPD_2227 CDS
T00345
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPD_2227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpd03019
]
RPD_2227
03110 Chaperones and folding catalysts [BR:
rpd03110
]
RPD_2227
03029 Mitochondrial biogenesis [BR:
rpd03029
]
RPD_2227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpd04147
]
RPD_2227
Enzymes [BR:
rpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RPD_2227
Messenger RNA biogenesis [BR:
rpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPD_2227
Chaperones and folding catalysts [BR:
rpd03110
]
Heat shock proteins
HSP60 / Chaperonin
RPD_2227
Mitochondrial biogenesis [BR:
rpd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RPD_2227
Exosome [BR:
rpd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RPD_2227
Exosomal proteins of other body fluids (saliva and urine)
RPD_2227
Exosomal proteins of breast cancer cells
RPD_2227
Exosomal proteins of colorectal cancer cells
RPD_2227
Exosomal proteins of bladder cancer cells
RPD_2227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
ABE39462
UniProt:
Q138M7
LinkDB
All DBs
Position
complement(2491839..2493482)
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKEVKFGVDARDRMMRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEI
ELDDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGGKAVAAGMNPMDLKRGI
DLAVEAVVADLVKNSKKVTSNEEIAQVGTISANGDVEIGKFLSDAMKKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFVTNADKMRVEFDDAYILINEKKLSNLNELLPLLEAV
VQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQA
ISEDLGIKMENVTLQMLGKAKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGIVPGGGVALL
RASEQLKRIKTQNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFD
SQTGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGAAGGMPPGGG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaagaagtgaaattcggcgtcgacgcccgcgaccgcatgatgcgcggcgtg
gacattctcgccaatgcggtgaaggtcacgctcggcccgaagggccgcaacgtcgtgctc
gacaagtcgttcggcgctccgcgtatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgacgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtcgcctcgaag
tcggccgacgccgccggtgacggcaccaccaccgcgaccgtactggcccaggcgatcgtc
cgcgaaggcggcaaggccgtcgccgccggcatgaacccgatggatctgaagcgtggcatc
gacctcgcggtcgaagcggtcgtcgcggatctcgtcaagaactccaagaaggtcacctcg
aacgaggagatcgcccaggtcggcacgatttcggccaatggcgacgtcgagatcggcaag
ttcctgtcggacgcgatgaagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagtcgctcgagaccgaactcgacgtcgtcgagggcatgcagttcgatcgcggctacatc
tcgccctacttcgtcaccaacgccgacaagatgcgcgttgaattcgacgacgcctacatc
ctgatcaacgagaagaagctctccaacctcaacgagctgctgccgctgctcgaagccgtc
gtccagaccggcaagccgctggtgatcgtcgctgaggacgtcgaaggcgaagcgctcgcc
accctcgtcgtcaaccgcctgcgcggcggcctcaaggtcgcggccgtcaaggctccgggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggcg
atctcggaagacctcggcatcaagatggagaacgtcacgctccagatgctcggcaaggcc
aagaaggtgatgatcgacaaggaaaacaccacgatcgtcaacggcgccggcaagaaggcc
gacatcgaagcccgcgtcgcgcagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctcgccggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgagatcgaagtgaaggagcgcaaggatcgcgttgatgacgcgatg
cacgccacccgcgctgcggtcgaggaaggcatcgtcccgggcggcggcgtcgctctgctg
cgcgcctccgagcagctcaagcgcatcaagacccagaacgacgaccagaagaccggcgtc
gagatcgtgcgcaaggcgctctccgccccggcccgccagatcgccatcaacgccggcgaa
gacggctcggtgatcgtcggcaaggtgctcgagaaggaccagtacaactacggcttcgac
agccagactggcgaatacggcgacctggtcaagaagggcatcatcgacccgaccaaggtg
gtccgcaccgcgatccagaacgcagcctccgttgccgcgctgctgatcaccaccgaagcg
atggtggccgagctgccgaagaagggtggcgctgccggtggcatgcccccgggcggcggc
ggcatgggcggcatggacttctga
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integrated database retrieval system
