Rhodopseudomonas palustris BisB5: RPD_2459
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Entry
RPD_2459 CDS
T00345
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00450
Selenocompound metabolism
rpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RPD_2459
Enzymes [BR:
rpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RPD_2459
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RPD_2459
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABE39689
UniProt:
Q137Q0
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All DBs
Position
2747089..2748336
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AA seq
415 aa
AA seq
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MTTHPAVSNGSYDVARVREDFPALALKVYGKDLVYLDNAASAQKPRVVLERMTKAYESEY
ANVHRGLHYLANAATEAYEGGRHRVQKFLNAKRPEEIIFTRNATEAINLVASSFGAPNIG
EGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAPVDDDGNFLIDEFEKLLSSKTKLVAIT
QMSNALGTIVPVKDVVKLAHDRGIPVLVDGSQGAVHLTIDVQDIDCDFYIMTGHKLYGPT
GIGVLYGKYDVLAKMRPFNGGGEMIREVAQDWVTYGDPPHRFEAGTPAIVEAVGLGAAID
YVNSIGKERIAAHEHDLLTYAQDRLREINSLRLIGTAKGKGPVISFEMKGAHPHDIATVI
DRQGIAVRAGTHCVMPLLERFQVTATCRASFGMYNTREEVDQLAQALIKARDLFA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcacccggcggtcagcaacggcagctacgatgtcgcgcgggtgcgcgaggat
ttccccgcgctggcgctcaaggtctacggcaaggatctggtctatctcgacaacgccgcc
tcggcgcagaagccgcgcgtcgtgctggagcggatgaccaaggcgtatgagagcgaatac
gccaacgtgcatcgcgggctgcattatctcgccaacgccgcgaccgaagcctatgagggc
ggccgccaccgggtgcagaagtttctcaacgccaagcggccggaagagatcatcttcacc
cgcaacgccaccgaggcgatcaatctggtcgcgtcgtcgttcggcgcgccgaatatcggc
gagggcgacgagatcgtgctctcgatcatggagcaccattccaacatcgtgccatggcac
ttcctgcgcgagcggcagggcgcggtgatcaaatgggcgccggtcgacgacgacggcaat
ttcctgatcgacgaattcgagaagctgctgtcgtcgaagaccaagctggtcgcgatcacc
cagatgtcgaatgcgctcggcaccatcgtgccggtcaaggacgtggtgaagctcgcgcac
gaccgcggcattccggtgctggtcgacggcagccagggcgcggtgcatctcacgatcgac
gtccaggacatcgattgcgacttctacatcatgaccgggcacaagctgtacggcccgacc
ggaatcggcgtgctgtacggcaagtacgatgtcctcgccaagatgcggccgttcaacggc
ggcggcgagatgatccgcgaagtcgcgcaggactgggtgacctatggcgacccgccgcac
cggttcgaggccggcacgccggcgatcgtcgaggcggtcgggctcggtgctgcgatcgac
tacgtcaattcgatcggcaaggagcggatcgcggcgcacgaacacgatcttttgacctac
gcccaggatcggctgcgcgagatcaattcgctgcggctgatcggcaccgccaagggcaag
ggaccggtgatttccttcgaaatgaagggcgctcacccgcatgacatcgccaccgtgatc
gaccgccaggggattgcggtgcgcgccggaacccattgcgtgatgccgttgctggagcgg
ttccaggtcacggcgacgtgccgcgcatcgttcggcatgtataatacccgtgaggaagtc
gaccaactcgcacaggcgctgatcaaggcgcgggatctgttcgcatga
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