Rhodopseudomonas palustris BisB5: RPD_2743
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Entry
RPD_2743 CDS
T00345
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03420
Nucleotide excision repair
rpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPD_2743
03430 Mismatch repair
RPD_2743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpd03400
]
RPD_2743
Enzymes [BR:
rpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPD_2743
DNA repair and recombination proteins [BR:
rpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPD_2743
MMR (mismatch excision repair)
Other MMR factors
RPD_2743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABE39972
UniProt:
Q136L7
LinkDB
All DBs
Position
3064417..3066483
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AA seq
688 aa
AA seq
DB search
MSLPATYLDGLNPEQRCAVEHGVGAGPCPPLLVIAGAGSGKTNTLAHRVAHLVVNGADPH
RILLMTFSRRAAAEMTRRVERIARRVMGDGARGGYGALSWAGTFHGIGARLLREHAERIG
LDPAFTIHDREDSADLMNLVRHDLGFSKTESRFPAKATCLSIYSRCVNAGLPLDQVLGAN
YPWCAGWAAELKQLFAGYVDAKQRHNVLDYDDLLLYWAQTMTEPALADEIGSRFDHVLVD
EYQDTNALQASILLGLKPEGRGLTVVGDDAQSIYSFRAATVRNILDFPKAFSPPARIVTL
DRNYRSTQAILGAANGVIDLAAERFTKNLWTDRAIGARPQLVGVRDEADQARYIVERVLE
HRESGTTLKQQAVLFRTSSHSAPLELELTRRNIPFVKFGGLKFLDAAHVKDMLALLRFVQ
NPRDRVAGFRVMLLIPGIGPASAQKALDAISAAADPLAALANIPSPPRAGADWRDFIDAV
RELRDGVAGWPAEIERARLWYEPHLDRIHDDAATRRADLVQLAQIASGYPSRERFLTELT
LDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGTGTSAEIE
EERRLLYVAMTRARDDLHLVVPQRFFTHGQNAMGDRHVYAARSRFIPDRLLTLFERVSWP
HVAPSTAGYPTRQAPPIDIGARMRGMWR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgcccgcaacctatctcgacggcctcaatccggaacagcgttgcgccgtcgaa
cacggcgtgggtgcgggtccctgcccgccgctgctggtgatcgccggcgccggttccggc
aagaccaacacgctggcgcatcgcgtcgcgcatctcgtcgtcaacggcgccgatccgcat
cgcattctgctgatgacgttctcgcgccgcgccgccgccgagatgacgcggcgtgtcgag
cggatcgcgcgccgcgtgatgggcgatggcgcacgcggaggttacggcgcactgagctgg
gccggaacgttccacggcatcggcgcgcggctgctgcgcgaacatgccgagcgcatcggc
ctcgatccggccttcacgattcacgaccgcgaggactccgccgacctgatgaatctggtc
cggcacgacctcggtttctcgaagacggaaagccgtttccccgccaaggcgacctgcctg
tcgatctactcgcgctgcgtcaatgccgggctgccgctcgatcaggtgctcggcgcgaac
tatccgtggtgcgccggctgggctgccgagctgaagcagttgttcgccggctatgtcgac
gccaagcagcgccacaacgtgctggattacgatgatctgctgctgtactgggcgcagacc
atgaccgagccggcgctggccgacgagatcggcagccggttcgaccatgtgctggtcgac
gaatatcaagacaccaacgcgctgcaggcgtcgatcctgctggggctcaagcccgagggc
cggggcctcaccgtggtcggcgacgacgcgcagtcgatctattcgttccgcgccgccacc
gtgcgcaacatcctcgacttcccgaaggcgttcagcccgccggcccgcatcgtcacgctc
gaccgcaattatcggtcgacgcaagccatcctcggcgcggcgaacggcgtgatcgatctc
gccgccgagcgcttcaccaagaatctctggaccgaccgcgccatcggagcgcgaccgcag
ctcgtcggcgtgcgcgacgaggccgatcaggcgcgctatatcgtcgagcgcgtgctcgag
catcgcgaaagcggaaccacgctgaagcaacaggcggtgctgtttcgcacctcgtcgcat
tccgcgccgctcgaactcgaactgacccgccgcaacattcccttcgtgaagttcggcggg
ttgaaatttctcgacgccgcgcacgtcaaggacatgctggcgctgctacgcttcgtgcag
aacccgcgcgaccgggtcgccggcttccgggtgatgctgctgatacccggcatcggcccc
gcctcggcgcagaaggcgctggacgccatcagcgccgccgccgatccgctcgccgcgctc
gccaatatcccctcaccgccgcgcgccggcgccgattggcgcgacttcatcgacgcggtg
cgcgagttgcgcgacggcgtcgccggctggccggcggagatcgaacgcgcgcggctgtgg
tatgagccgcatctcgaccggattcacgacgacgccgcgacgcgccgtgccgacctggtg
cagctcgcgcagatcgcctccggctatccgtcgcgcgagcgcttcctcaccgagctgacg
ctcgacccgccggacgcgacgtccgatcaggctggtgtgccgctgctcgacgaggactat
ctgatcctgtcgacgatccattccgccaagggccaggaatggaagtcggtgtttgtgctc
aacgttgtcgacggctgtatgccgtccgatctcggcaccggaacctccgccgaaatcgag
gaagagcgccgcctgctctatgtcgcgatgacgcgggcgcgcgacgatctgcatctcgtg
gtgccgcagcgcttcttcacgcacggccagaatgcgatgggcgatcgccacgtctacgcc
gcgcgcagccgcttcattcccgacaggctgctgactttgttcgagcgcgtgagctggcca
cacgtcgcgccatccaccgccggctatcccacccggcaagcgccgccgatcgatatcggc
gcgcggatgcgcgggatgtggcgctga
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