Rhodopseudomonas palustris BisB5: RPD_2787
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Entry
RPD_2787 CDS
T00345
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RPD_2787
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpd01007
]
RPD_2787
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpd03016
]
RPD_2787
Enzymes [BR:
rpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RPD_2787
Amino acid related enzymes [BR:
rpd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RPD_2787
Transfer RNA biogenesis [BR:
rpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RPD_2787
Prokaryotic type
RPD_2787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ABE40015
UniProt:
Q136H4
LinkDB
All DBs
Position
complement(3104320..3105624)
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AA seq
434 aa
AA seq
DB search
MHDIKAIRDNPTAFDAAYTRRGLSPIADSLIKLDETRRIAILASEQAQARRNAASKEIGE
AKKAKDNARAEVLMAEVAELKTTMPALEAAVKDADEALKTALSEIPNLPLADVPEGADEH
GNVERHHFGAKRSYTFTPKAHDDLGEALGMMDFEAAAKLSGARFVVLKNGLARLERAIGQ
FFLDVHTGEHGYTEVNPPLLVKDDAMFGTAQLPKFRDDQFAAGAIGSGGEGYWLIPTAEV
SLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFTKVELVSITTPEK
SKDEHERMLSCAEEVLRRLGLHYRVMTLCTGDMGFASQKTYDIEVWMPGQGEGGAYREIS
SCSVCGDFQARRMDARSRGPDGKPRFVHTLNGSGTAVGRALIAVIENYQQEDGSIAVPDV
LLPYMGGLKVIAAA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatcaaagcgatccgcgacaatccgactgcgttcgacgccgcttacacgagg
cgagggctctcgccgatcgcggacagtctgatcaagctcgacgagacccgccgcatcgcg
attctcgcctcggagcaggcgcaggcgcggcgcaatgcggcgtcgaaggagatcggcgag
gccaagaaggccaaggacaatgcgcgcgccgaggtgctgatggccgaggtcgccgagctc
aagaccacgatgccggcgctcgaggccgcggtgaaggacgccgacgaggcgctgaagaca
gcgctgtcggaaatccccaatttgccgcttgccgacgtgcccgagggcgccgacgagcac
ggcaatgtcgagcggcatcatttcggcgccaagcgcagctacacgttcacgccgaaggcg
catgacgatctcggcgaagcactgggcatgatggacttcgaagccgccgcgaaactctcg
ggcgcgcgcttcgtcgtgctgaagaacggcctcgcccggctcgagcgcgcgatcggtcag
ttctttctcgacgtccacaccggcgagcacggctacacggaagtgaatccgccgttgctg
gtgaaggacgacgcgatgttcggcacggcgcagcttccgaaatttcgtgacgatcagttc
gctgccggcgccatcggcagtggaggtgagggatattggctcatccccaccgccgaagtc
tcgctcaccaatctcgtccgcgaatccatcctcgacgaaaaagagctgccaatgcgcttg
accgcgttgacgccttgcttccgcgccgaggccggcgctgcgggacgtgatacgcgcggg
atgatccgacagcatcagttcaccaaggtcgagctggtgtcgatcaccacgccggagaag
tccaaggacgagcacgaacggatgctgagctgcgccgaggaggtgctgcgccggctcggg
ctgcactaccgggtgatgacgctgtgcaccggcgacatgggcttcgcctcgcagaagacc
tacgacatcgaagtctggatgccgggacaaggtgagggcggcgcgtatcgcgagatttca
tcgtgctcggtgtgcggtgacttccaggcgcgccggatggatgcgcggtcgcgcggcccg
gacggcaagccgcgcttcgtccacacgctgaacggctccggcaccgccgtcggccgcgcg
ctgattgcggtgatcgagaactatcagcaagaggacggctcgatcgccgtgcccgacgtg
ctgctgccctatatgggcgggctgaaagtgatcgcggccgcgtga
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