KEGG   Rhodopseudomonas palustris BisB5: RPD_2807
Entry
RPD_2807          CDS       T00345                                 
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rpd  Rhodopseudomonas palustris BisB5
Pathway
rpd00010  Glycolysis / Gluconeogenesis
rpd00020  Citrate cycle (TCA cycle)
rpd00260  Glycine, serine and threonine metabolism
rpd00280  Valine, leucine and isoleucine degradation
rpd00310  Lysine degradation
rpd00380  Tryptophan metabolism
rpd00620  Pyruvate metabolism
rpd00630  Glyoxylate and dicarboxylate metabolism
rpd00640  Propanoate metabolism
rpd00670  One carbon pool by folate
rpd00785  Lipoic acid metabolism
rpd01100  Metabolic pathways
rpd01110  Biosynthesis of secondary metabolites
rpd01120  Microbial metabolism in diverse environments
rpd01200  Carbon metabolism
rpd01210  2-Oxocarboxylic acid metabolism
rpd01240  Biosynthesis of cofactors
Module
rpd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rpd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rpd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RPD_2807
   00020 Citrate cycle (TCA cycle)
    RPD_2807
   00620 Pyruvate metabolism
    RPD_2807
   00630 Glyoxylate and dicarboxylate metabolism
    RPD_2807
   00640 Propanoate metabolism
    RPD_2807
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RPD_2807
   00280 Valine, leucine and isoleucine degradation
    RPD_2807
   00310 Lysine degradation
    RPD_2807
   00380 Tryptophan metabolism
    RPD_2807
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RPD_2807
   00670 One carbon pool by folate
    RPD_2807
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rpd04147]
    RPD_2807
Enzymes [BR:rpd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RPD_2807
Exosome [BR:rpd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RPD_2807
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA DAO HI0933_like FAD_binding_3 Thi4 AlaDh_PNT_C Lys_Orn_oxgnase 3HCDH_N 2-Hacid_dh_C NAD_binding_7
Other DBs
NCBI-ProteinID: ABE40035
UniProt: Q136F4
LinkDB
Position
complement(3128487..3129908)
AA seq 473 aa
MSDTAFDVIIIGSGPGGYVAAIRAAQLGFKTAIVEKSYLGGICLNWGCIPTKALLRSAEI
YHYMQHAKDYGLSADNVSFDPKAVVARSRGVSKRLNDGVGFLMKKNKISIIWGAATIDAP
GKVTVAASKTEAPKGALPPGSYQAKHIILATGARPRVLPGLEPDQKLVWTYFEAMVPEKM
PKSLLVVGSGAIGIEFASFFHTMGAKVTVVEVLPQILPVEDAEIAGLARKRFEKQGITIM
TGAKVTRLDKKADSVVATIDPGNGKPETQEFDRVISAVGVVGNVENLGLEKLGLKIERGT
IVTDGLGRTSVPGVYAIGDVAGPPMLAHKAEHEGVICVEAIKGLHPHPLDKKLIPGCTYC
NPQIASVGLTEAKAKEEGREIRVGRFPFAGNGKAIALGEDQGLVKVIFDKKTGQLLGAHM
IGAEVTELIQGYVVAMNLETTEEELMHTVFPHPTLSEMMKEAVLDAYGQVLNA
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtccgacaccgccttcgacgtcatcatcatcggctccggccccggcggctatgtcgcg
gcgatccgggcggcgcagctcggcttcaagaccgcgatcgtcgagaagtcgtatctcggc
ggcatctgtctgaactggggctgcatcccgaccaaggcgctgctgcgctcggccgagatc
tatcactacatgcagcacgccaaggattacgggctgtcggccgacaacgtctcgttcgat
ccgaaggcggtcgtggcgcgctcgcgcggggtgtcgaagcgcctcaatgacggcgtcggc
ttcctgatgaagaagaacaagatcagcatcatctggggcgcggccacgatcgacgcgccg
ggcaaggtcacggtcgccgcgtccaagaccgaggcgccgaagggcgcgcttccgcccggc
agctatcaggccaagcacatcatcctcgccaccggcgcgcggccgcgggtgctgccgggg
ctcgagccggaccagaagctggtctggacctatttcgaggcgatggtgccggagaagatg
ccgaagtcgctgctggtggtgggctccggcgcgatcggcattgaattcgcctcgttcttc
cacaccatgggcgccaaggtcaccgtggtcgaggtgctgccgcagatcctgccggtcgag
gatgccgagatcgcggggctcgcccgcaagcggttcgagaagcagggcatcaccatcatg
accggcgccaaggtcacccggctcgacaagaaggccgacagcgtggtcgctacgatcgat
cctggcaacggtaagcccgagacgcaggaattcgaccgggtgatctcggcggtcggcgtg
gtcggcaatgtcgagaacctcgggctggaaaagctcggcctgaagatcgagcgcggcacc
atcgtcacggacggtctgggccgaaccagcgtgcccggcgtctacgcgatcggcgacgtc
gccggcccgccgatgctggcgcacaaggccgagcatgagggcgtgatctgcgtcgaggcg
atcaagggcctgcatccgcacccgctcgacaagaagctgatcccgggctgcacctactgc
aatccgcagatcgcctctgtcggcctgacagaggccaaggcgaaggaggaggggcgggag
atccgggtcggccgcttcccgttcgccggcaacggcaaggcgatcgcgctcggcgaggat
cagggcttggtcaaagtgatcttcgacaagaagaccggccagttgctcggggcgcatatg
atcggcgccgaagtcaccgagctgatccagggctatgtggtggcgatgaacctcgaaact
accgaggaagagctgatgcacaccgtcttcccgcacccgacgctgtcggagatgatgaag
gaagccgtgctcgacgcctacggccaggtgctcaacgcctga

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