Rhodopseudomonas palustris BisB5: RPD_2905
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Entry
RPD_2905 CDS
T00345
Name
(GenBank) Amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00330
Arginine and proline metabolism
rpd00360
Phenylalanine metabolism
rpd00380
Tryptophan metabolism
rpd00627
Aminobenzoate degradation
rpd00643
Styrene degradation
rpd01100
Metabolic pathways
rpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RPD_2905
00360 Phenylalanine metabolism
RPD_2905
00380 Tryptophan metabolism
RPD_2905
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
RPD_2905
00643 Styrene degradation
RPD_2905
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
RPD_2905
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
ABE40133
UniProt:
Q135V6
LinkDB
All DBs
Position
complement(3237004..3238428)
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AA seq
474 aa
AA seq
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MAIKDYSEHDGVGLAELVRNKQVSARELLDEAIARTDALDGKLNAVVVRHDDYARQQIEA
GLPDGPFTGVPFLLKDLDLLAGTKTTFGASVYKDFVAPHTGTLAQRFLAAGVTIYGKSAS
PEFGLMPTTESRLHGPTRNPWNLDHSSGGSSGGAAAAVAARILPVAHASDGGGSIRIPAS
ACGVFGLKPTRARNPIGPDRGEGWGGFACGHVVSISVRDSAVMLDALHGPEPSSPYVAPP
PERPFAQEVGRDPGKLRIAFTDVSTYGDPIDPEIAAAVRDTARLLEGLGHHVEQHAPKLP
ADPAAVIATIVACNTGLTVKLAEQALGRAITDRDFEVLTLASAANAGRSSGLDYCAAQLA
AFQISRSLADFFATCDVFLSPTLCTLPLKIGELDTMARDLSGISPLLQRYIPGTSLFNMS
GQPAMSVPLAWSGSGLPIGMMFAGRFGDEATLLRLASQLEQERPWKNRRPPLCA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaaggattacagcgagcacgacggcgtcggcctcgccgagctggtgcgcaac
aaacaggtcagcgcgcgcgaattgctggatgaggcgattgcccgcaccgacgcgctcgat
ggcaagctcaacgcggtggtggttcgccacgacgactacgcgcgacagcagatcgaggcc
ggacttccggacggcccgttcaccggcgtgccgtttctgctgaaggatctcgatctgctc
gccgggacgaagacgacgttcggcgccagcgtctacaaggatttcgtcgcgcctcacacc
ggcacgctggcgcaacgcttcctcgccgccggcgtgacgatctacggcaagagcgccagt
ccggaattcggcctgatgccgacgacggaatcgcggctgcatggcccgacgcgcaatccg
tggaatctcgatcattcctccggcggctcgtcgggcggcgccgcggccgcggtggcggcg
cgcatcctgccggtggcacatgccagcgacggcggcggttcgatccggattccggcctcg
gcctgcggcgtgttcgggctgaagccgacccgggcgcgtaatccgatcgggccggatcgc
ggcgagggctggggcggcttcgcctgcggacatgtcgtgagcatcagcgtacgcgacagc
gccgtgatgctggatgcgctgcacggtcccgaaccgtcgagcccttacgttgcgccgccg
ccggagcgtccattcgcgcaggaggtcggccgcgatccggggaagctgcggatcgctttc
accgatgtctcgacctatggcgatccgattgatcccgagatcgccgccgcggtgcgcgac
actgcgcggctgctggagggcctcgggcaccatgtcgaacagcacgccccgaagctgccg
gccgatccggccgctgtgatcgcgaccatcgtcgcctgcaacaccgggctcacggtcaag
ctcgccgaacaggcgctcggccgcgccatcaccgatcgcgatttcgaagtgttgacgctg
gccagcgccgccaatgccggtcgctccagcggcctcgactattgcgcagctcaactcgcc
gcatttcagatatcgcgcagcctcgccgatttcttcgcgacctgcgacgtcttcctgtcg
ccgacgctgtgcacgctgccgctcaagatcggcgagctcgatacgatggcgagggatctg
tccgggatcagcccgcttctgcagcgctacattcccggcaccagcctgttcaacatgtcg
ggccagccggcgatgtcagtaccgctggcgtggagcggaagcggactgccgatcggtatg
atgttcgcgggtcggttcggcgacgaggcgacgctgctgcgtctggcgtcccagctcgag
caggaacggccgtggaaaaaccgccggccgccgctctgcgcctga
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