KEGG   Rhodopseudomonas palustris BisB5: RPD_2912
Entry
RPD_2912          CDS       T00345                                 
Name
(GenBank) ribonucleoside-diphosphate reductase class II
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rpd  Rhodopseudomonas palustris BisB5
Pathway
rpd00230  Purine metabolism
rpd00240  Pyrimidine metabolism
rpd01100  Metabolic pathways
rpd01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:rpd00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    RPD_2912
   00240 Pyrimidine metabolism
    RPD_2912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpd03400]
    RPD_2912
Enzymes [BR:rpd01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     RPD_2912
DNA repair and recombination proteins [BR:rpd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    RPD_2912
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Mg296
Other DBs
NCBI-ProteinID: ABE40140
UniProt: Q135U9
LinkDB
Position
3245979..3249749
AA seq 1256 aa
MKIERRYTTDGQSPYAAIQFRLTTSEIRNPDGSVVFRLENVEVPDSWSQVASDVLAQKYF
RKAGVAARLKKVEEETVPSWLWRSVPDTEALATLPDSERFTSEHSSKQVFDRLAGCWTYW
GWKGDYFSSEDDARAFYDELRYMLASQMVAPNSPQWFNTGLHWAYGVDGPGQGHYYVDHK
TGKLTKSKSAYEHPQPHACFIQGIEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSRLRG
EGERLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVKE
EQKVSALVTGSKLNQKHLKAILKACVNCQGSGDDCFDPEKNPALRREVKLARRALVTDAM
IKRVIQYAKQGYKEIDFPIYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVETDGDWNLT
GRTTKKVMKTLKARDLWEKIGYAAWASADPGLHFNTTMNDWHTCKASGDIRASNPCSEYM
FLDDTACNLASANLLTFYDTTANVFDLGAYEHLCRLWTVVLEISVLMAQFPSKQIAELSY
EFRTLGLGFANIGGLLMTMGLSYDSKEGRALCGALSAIMTGVSYATSAEMAAKLGPFPGY
KKNAAHMLRVIRNHRRAAHGESRGYEALSVAPVPLDHAGCPIPEAITHAKAAWDRALELG
ELHGYRNAQVSVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYWKIINRAVPAALR
ILGYPENQIAEIEAYAVGHGSLSNAPAINHSTLKAKGFTDEALAKVEAALPTAFDIKFAF
NKWTFGEDFLRQTLKIEADAIAAPNFDLLAALGFSKREIEAANIHICGAMTVEGAPHLKA
DHYAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCKSAYM
LSWKLALKANALYRDGSKLSQPLSSQLISDDDEDDDALDAFLEKPMAARAAHVSEKVVER
LVERIVVMRERERMPDRRKGYTQKAVVGGHKVYLRTGEYDDGRIGEIFIDMHKEGAALRS
FINNFAIAVSLGLQYGVPLEEYVDAFTFTRFEPAGPVQGNDSIKYATSILDYVFRELAVS
YMGRFDLAHVDPSETGFDAIGKGVDEGKAPEGTPSSHAATKYLSKGLTRSRTDNLVVMRG
VPASPDSGSAPVKMAYSQPETHAKSTSRIGDVLEGATALKQEVQTDLSPTEKLEALQWSK
ANTAATQPAASKAERRAEAKARGYEGDSCGECGNFTLVRNGTCMKCDTCGSTTGCS
NT seq 3771 nt   +upstreamnt  +downstreamnt
atgaagatcgagcggcgctacaccactgacggccagtcaccctatgcggcgattcagttc
cggctgacgacgagcgagattcgcaatccggacggctccgtggtgttccgcctcgaaaat
gtcgaagtgcccgactcgtggtcgcaggtcgcctccgacgtgctggcccagaaatatttc
cgcaaggcgggcgtcgctgcgcgcctgaagaaggtcgaggaagaaaccgtgccgtcgtgg
ctgtggcgctcggtgcccgacaccgaggcgctcgccaccctgcccgatagcgagcgcttc
accagcgagcattcgtccaagcaggtattcgaccgcctcgccggctgctggacctattgg
ggctggaagggcgattacttctcgtccgaggacgacgcccgcgcgttctacgacgagctg
cgctacatgctggcgtcgcagatggtcgcgccgaattcgccgcaatggttcaacaccggc
ctgcattgggcttacggcgtcgacggccccggccagggccactattacgtcgatcacaag
accggcaagctgaccaagtcgaaatccgcctacgagcatccgcagccgcacgcctgcttc
atccagggcatcgaggacgacctcgtcaacgagggcggcatcatggacctgtgggtgcgt
gaggcgcggctgttcaaatacggctccggcaccggctccaatttctcgcggctgcgcggc
gaaggcgaacgcctgtccggcggcggccgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgccgccggcgcgatcaagagcggcggcaccacgcggcgcgccgccaagatg
gtggtggtcgacgccgaccatccggacatcgaggcctatatcgactggaaggtgaaggag
gagcagaaggtctcggctctcgtcaccggctccaagctcaaccagaagcacctcaaggcg
atcctgaaggcctgcgtcaactgccagggctcgggcgacgactgcttcgaccccgagaag
aaccctgccctgcgccgcgaggtcaagctcgcgcgccgcgcgctggtgactgacgcgatg
atcaagcgcgtcatccagtacgccaagcagggctacaaggagatcgacttcccgatctac
gacaccgactgggattcggaggcctacctcaccgtctccggccagaactccaacaattcg
gtctcgctgaaggacgacttcttgcgcgcggtggaaacggatggggattggaacctcacc
ggccgcaccaccaagaaggtgatgaagacgctgaaggcccgcgatctgtgggagaagatc
ggctacgccgcctgggccagcgccgatcccggcctgcacttcaacaccacgatgaacgac
tggcacacctgcaaggcctcgggcgacatccgggccagcaatccgtgctcggaatacatg
ttcctggacgacaccgcctgcaacctcgcctcggccaacctgctgaccttctacgacacc
acggcgaacgtgttcgacctcggcgcctatgagcatctgtgccggctgtggaccgtcgtg
ctcgagatctcggtactgatggcgcagtttccgtcgaagcagatcgccgagctgtcttac
gagttccgcaccctcggcctcggcttcgccaatatcggcggcctgctgatgaccatgggc
ctcagctacgactccaaggaaggccgcgcgctgtgcggcgcgctgtcggcgatcatgacc
ggcgtgtcgtatgcgacgtcggccgagatggcggcgaagctcggcccgttccccggctac
aagaagaacgccgcgcacatgctgcgggtgatccgcaatcaccgccgcgccgcccacggc
gaaagccgcggctatgaggcgctgtcggtcgcccctgtcccgctcgaccacgccggctgc
ccgatccccgaagcgatcacgcacgccaaggcggcgtgggacagagcgctcgaactcggc
gaactgcacggctatcgcaacgcgcaggtttcggtggtcgcgccgaccggcacgatcggc
ctggtgatggattgcgacaccaccggcatcgagcccgacttcgcgctggtgaagttcaag
aagctcgccggcggcggctactggaagatcatcaaccgcgccgtgcccgccgccttgcgc
atcctcggctatccggaaaaccagatcgccgagatcgaggcctatgcggtcggccacggc
tcgctgtccaacgcgccggcgatcaaccattcgaccctcaaggcgaagggcttcaccgac
gaagcgctggccaaggtcgaggcggcgctgccgaccgccttcgacatcaaattcgccttc
aacaaatggacgttcggcgaggacttcctgcgccagaccctgaagatcgaggccgacgcg
atcgccgcgccgaacttcgacctgctcgccgcgctcggcttctccaagcgcgagatcgag
gccgccaacatccacatctgcggcgcgatgaccgtggaaggcgcgccgcatctgaaggcg
gatcactacgcggtgttcgattgcgccaatccctgcggcaagatcggcaagcgctatctg
tcggtcgagagccacatccggatgatggcggcggcgcagccgttcatctcgggcgcgatc
tccaagaccatcaacatgccgaacgacgccacggtggaggactgcaagtccgcctacatg
ctgtcgtggaagctcgcgctgaaggccaacgcgctgtatcgcgacggctcgaagctgtcg
cagccgctgtcgtcgcaactgatctccgacgacgacgaggatgatgatgcgctcgacgcc
ttcctggagaagccgatggcggcgcgcgccgcccacgtctccgagaaggtggtggagcgt
ctggtcgagcgcatcgtggtgatgcgcgagcgcgagcggatgccggatcgccgcaagggc
tacacccagaaggcggtggtcggcggccacaaggtctatctgcgcaccggcgaatatgac
gacggccggatcggcgagatctttatcgacatgcacaaagagggcgccgccctccggtcg
ttcatcaataatttcgcgatcgcggtgtcgctcggcctgcaatacggcgtgccgctcgag
gaatatgtcgatgccttcaccttcacccgcttcgagcccgcgggcccggtgcagggcaac
gactcgatcaagtatgccacctcgatcctcgactacgtgttccgcgaactcgcggtcagc
tacatgggccggttcgacctcgcccatgtcgatccgagcgagaccggcttcgacgccatc
ggcaagggcgtcgacgaaggcaaggcgccggaaggcacgccgtcgagccacgccgcgacc
aaatatctgtcgaagggcctgacccgctcgcgcaccgataatctggtggtgatgcgcggc
gtgccggcctcgcccgacagcggctcggctccggtcaagatggcctactcccagccggag
acccacgccaagtcgacctcccgcatcggcgacgtcctcgaaggcgccaccgcgctgaag
caggaagtccagaccgatctgtcgccgaccgaaaagctcgaagcgctgcaatggagcaag
gccaacaccgccgccacgcagcccgcagcctcgaaagccgaacgtcgcgccgaagccaag
gcccgcggctacgagggcgacagctgcggcgaatgcggcaacttcacgctggtgcggaac
gggacgtgcatgaagtgtgatacgtgcggcagcacgacggggtgttcgtaa

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