Rhodopseudomonas palustris BisB5: RPD_3065
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Entry
RPD_3065 CDS
T00345
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_3065
Transporters [BR:
rpd02000
]
Other transporters
Pores ion channels [TC:
1
]
RPD_3065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABE40291
UniProt:
Q135E8
LinkDB
All DBs
Position
complement(3413122..3415482)
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AA seq
786 aa
AA seq
DB search
MNGDTPTKVAIATGTIRQARGGAFRTVTAAVLLSLVSQACLAQSATPGSTIALDPILVEQ
SRQPERSAVRSRTVVSRPSASAPTAAQQQAQPAQSADVVRRRFDVLPGGVALVAQQDMAS
RGNPTLANSLSGIPGLIVQNFLGSNDQPRIQMRGAAQQNPAERGVLILNNGLPINRADGS
FIVGFANPQQAESIEVYRGYMANRLGATVLSGAINFVSPTGSSQPGAQIGVSGGSFGQFN
TSGQVGGKKDNVDAFFQFDNTRRDGFRDYNSSERVSVNGNVGVALSENVKTRFFMGYTDL
GFDVAGPLNKAALYADPKQTATGPRVVGGVATNPGPNAVRDKPRREASQFMVGNRTTATF
DAHLFDVAMGYTYTDDQFRFPISSGVRTTQGGDFTGVARYAYNPAAALLPLFETTAQYSV
GSADRGYYLNQSGQTGAQFGANRLNAQTLSLYAGANVPVWQQWVLSPSISYAHATRDNDD
VYTAARRPTIAYNPSNPTALLPNGSVATQSSSYSRNYSGWSPSLALTYRPDAMQTFFIAG
SHSFEPPTHDDLIATVNSTPNSSPGRPTPNGASLAAAAFATPNLSAQTANTVEGGWRGRT
DRFSWDIVTYYSWVDNELLTLRDVTGAALAAVNADRTTHFGVELGAGVKFTDRLSGRLAY
TYQDFRFADDPVRGNNHLGGVVPHLIHAQLQLQATDAWMVQGAVRWSPTEVAVDNMNTLF
ADPYAVADLRTEYQIDKTFRVFGEITNLFDKTYAATTLVVDQATSGQAAFLPADGRGFYA
GIKAKF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggatacaccaaccaaggtcgcgatcgcgaccgggactatcaggcaggcacgc
ggcggagcgtttcggaccgtcacagccgccgtgctgttgtccttggtcagccaggcctgt
ctcgcgcaatcggcgacgcctggatcgaccatcgcgctcgatccgatcctcgtcgaacaa
tcgcggcagccggagcggtccgcggtgcgctcgcggacggtggtctcgcgaccatcggcc
tccgcgcctaccgccgcgcagcagcaggcgcagccagcccagtccgcggacgtcgtacgc
cgtcgcttcgacgtgctgcccggcggcgtcgcgctggtggcccagcaggacatggccagt
cgcggcaatccgacgttggccaacagcctgagcggtatccccggactgatcgtgcagaat
ttcctgggctccaatgaccagccgcggatccagatgcgcggggccgcccagcagaatccg
gccgagcgcggcgtgctgatcctcaacaacggtttgccgatcaatcgcgcggacggctcc
ttcatcgtcggcttcgccaatccgcaacaggccgagtcgatcgaagtgtatcgcggctac
atggccaatcgcctcggcgccacggtgctgagcggtgcgatcaatttcgtgtcgccgacc
ggttcgagtcagccgggcgcccagatcggggtgagtggcggcagtttcggccagttcaac
accagcggtcaggtcggcggcaagaaggataatgtcgatgcgttcttccagttcgacaac
accaggcgcgacggcttccgcgactacaattcgtcggagcgcgtcagcgtcaacggcaat
gtcggcgtcgcgctgtcggagaacgtcaagacccggttcttcatgggttacaccgacctc
ggcttcgacgtcgcgggtccgctgaacaaggccgcgctgtacgccgatccaaagcagacc
gcgaccgggccgagggtggtcggaggcgtcgcgaccaaccccggtcccaatgccgtgcgc
gacaagccgcggcgcgaggccagccaatttatggtcggcaaccgcaccacggcgacgttc
gacgcgcatctgttcgacgtcgcgatgggctacacctacaccgacgaccagttccgcttc
ccgatctcctcaggcgtccgcaccacgcagggcggcgacttcaccggcgtggcccgctac
gcctacaatccggctgccgcgctgctgccgctgttcgagaccaccgcgcaatacagcgtc
ggctctgccgatcgcggctactacctcaaccagagcggccagaccggcgcgcaattcggc
gccaaccggctgaacgcccagacgctgtcgctctacgcgggagccaacgtcccggtctgg
cagcaatgggttctgtcgccctcgatctcctacgcccatgcgacgcgggacaacgacgat
gtctacaccgcagcgcggcgtcccacgatcgcgtacaacccgtcgaacccgacggctctg
ctgccgaacggatctgtggcgacccaaagcagcagctattcgcgcaattattcaggctgg
agtccgagcctcgccttgacctaccggccggacgcgatgcagacgttcttcatcgccggc
agccacagcttcgagccgccgacccatgacgacctgatcgcaacggtcaacagcacgccg
aattcgagccccggccgcccgactccgaacggtgcctcgctggcggccgccgcgttcgcg
acgccgaacctgagcgcgcagacggcgaacacggtggaaggcggctggcgcggtcgcacc
gatcgcttctcctgggacatcgtgacctattactcatgggtcgacaacgaactgctcacg
ctgcgggatgtcaccggtgcggcgctggcggcggtcaacgccgaccggacgacgcatttc
ggcgtcgaactcggcgccggcgtcaagttcaccgatcggttgtccggacgtctggcctac
acctatcaggatttccgcttcgccgacgatccggtccgcggcaacaatcatctcggtggc
gtggtgccgcacctcatccatgcgcaattgcagttgcaggcgaccgacgcctggatggtg
cagggcgcggtgcgctggagtccgaccgaggtggcggtcgacaacatgaacacgctgttc
gccgacccctacgcggtggccgatctgcgcaccgagtaccagatcgacaaaaccttccgc
gtgttcggcgagatcaccaatctgttcgacaagacctatgcggccaccaccctggtggtc
gatcaggcgacgtccggccaagcggcgttcctgccggccgacgggaggggattctacgcg
ggtatcaaggcgaagttctga
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