Rhodopseudomonas palustris BisB5: RPD_3093
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Entry
RPD_3093 CDS
T00345
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00280
Valine, leucine and isoleucine degradation
rpd00630
Glyoxylate and dicarboxylate metabolism
rpd00640
Propanoate metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
Module
rpd_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPD_3093
00640 Propanoate metabolism
RPD_3093
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPD_3093
Enzymes [BR:
rpd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
RPD_3093
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
PCC_BT
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
RimK
Biotin_lipoyl_2
ATP-grasp_3
ATP-grasp_5
DUF2118
QRPTase_N
CbiC
HlyD_D23
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ABE40319
UniProt:
Q135C0
LinkDB
All DBs
Position
complement(3437262..3439337)
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AA seq
691 aa
AA seq
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MPIAVPAGRAEPPQGRKNKNMFKRILIANRGEIACRVIKTARLMGIETVAVYSEADRDAL
HVEMADEAVLIGPAAASESYLVIEKIIEACKKTGAEAVHPGYGFLSEREAFARALADAGI
VFIGPNPGAIAAMGDKIESKKAAAKAKVSTVPGFLGVIEDEKHAVKIADEIGYPVMIKAS
AGGGGKGMRIAHSTAEVAEGFGLAKAEAKASFGDDRVFIEKFIVDPRHIEIQVLGDKHGN
VIYLGERECSIQRRNQKVIEEAPSPLLDEGTRRKMGEQAVALAKAVNYDSAGTVEFVAGQ
DKSFYFLEMNTRLQVEHPVTEMVTGIDLVEQMIRVAAGEKLALAQKDVTLKGWAVESRVY
AEDPFRNFLPSIGRLVKYRPPAESSVSGVTVRNDTGVQEGGEISIFYDPMIAKLVTHAPS
RAAAIEAQAHALDAFYVDGIRHNIPFLSALMTHPRWREGNLSTGFIAEEFPQGFAARLPE
GDVARRIAAVGAAIDRVIGERKRKISGQMIGRAVIRERRRSVWLERSEIPLDVIREGDGF
VVRFVEAEGSLGQPHQLLSSWLPGDPVWQGTIDGHPLAVQVRSVPNGFRLAHHGYEVAVN
VFTEREASAARWMLEGNKADTGKKVLCPMPGLVISIAVVEGQEVKAGETLAVVEAMKMQN
VLRAERDGQVKKIHAAPGATLAVDALILEFA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgccgtcccggccgggagggcagaaccaccccaaggtcgcaagaacaagaac
atgttcaaacgtattctgatcgccaatcgcggcgagatcgcctgccgggtcatcaagacc
gcccgtttgatgggtatcgagacggtcgccgtctattccgaggcggatcgcgacgctctg
cacgtcgaaatggccgatgaagcggtcctgatcgggcctgcggcggcgtccgagagctat
ctggtgatcgagaagatcatcgaggcctgcaagaagacaggggccgaggcggtgcatccc
ggctacggcttcctgtcggaacgcgaggcgttcgcgcgcgcgctggcggatgccggcatc
gtcttcatcggtcccaaccccggcgcgatcgccgcgatgggcgacaagatcgaatccaag
aaggcggccgccaaggccaaggtctcgaccgttccgggcttcctcggcgtgatcgaggac
gagaagcacgcggtgaagatcgccgacgagatcggctatccggtgatgatcaaggcgtcg
gccggcggcggcggcaagggcatgcgcatcgcgcactcgaccgccgaggtcgccgaaggc
ttcggcctcgccaaggccgaagccaaagcctcgttcggcgacgaccgcgtcttcatcgag
aagttcatcgtcgatccgcgccatatcgaaatccaggtgctcggcgacaagcacggcaac
gtcatctatctcggcgagcgcgaatgctcgatccagcgccgcaaccagaaggtgatcgag
gaagcgccgtcgccgctgctcgacgaaggcacccgccgcaagatgggcgagcaggccgtc
gcgctggccaaggcggtgaactacgactccgccggcaccgtcgagttcgtcgccggccag
gacaagagcttctacttcctggaaatgaacacccgcctgcaggtcgaacatccggtcacc
gagatggtcaccggcatcgatctggtcgagcagatgatccgcgtcgccgccggcgagaag
ctggcgctggcccagaaggacgtgacgctgaagggctgggcggtggaaagccgcgtctat
gccgaagatccgttccgcaacttcctgccgtcgatcggccgcctcgtgaagtatcggccg
ccggccgagagctccgtctccggcgtcaccgtgcgcaacgacaccggcgtgcaggaaggc
ggggaaatctcgatcttctacgatccgatgatcgccaagctggtgacccacgcgccgtcc
cgcgccgcggcgatcgaggcgcaggcccatgcgctggacgcgttctatgtcgacggcatc
cgccacaacattccgttcctgtcggcgctgatgacgcatccgcgctggcgcgagggcaat
ctgtcgaccggcttcatcgccgaggaattcccgcagggcttcgcggcgcgtctgccggag
ggcgacgtcgcccgccgcatcgccgcggtcggcgccgcgatcgaccgtgtgatcggcgag
cgcaagcgcaagatctccggccagatgatcggccgggcggtgatccgcgaacggcgccgc
agcgtctggctggagcgcagcgagattccgctcgacgtgatccgcgagggcgacggcttc
gtggtgcgcttcgtcgaagccgaaggatcgctggggcagccgcatcaattgctgtcgtcg
tggcttcccggcgatccggtgtggcagggcacgatcgacggccacccgctggcggtgcag
gtccgctcggtcccgaacggattccggctcgcccatcacggctacgaggtggcggtcaac
gtcttcaccgagcgcgaggcttcggcggcgcgctggatgctggaaggcaacaaggccgac
accggcaagaaggtgctgtgcccgatgccgggcctggtgatctcgatcgcggtggtcgag
ggccaggaggtcaaggccggcgagacgctggcggtggtcgaggcgatgaagatgcagaac
gtgctgcgcgccgagcgcgacgggcaggtgaagaagattcacgctgcgcccggcgccacg
ctggcggtcgacgcgctgatcctcgagttcgcgtag
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