Rhodopseudomonas palustris BisB5: RPD_3141
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Entry
RPD_3141 CDS
T00345
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpd03000
]
RPD_3141
Transcription factors [BR:
rpd03000
]
Prokaryotic type
Helix-turn-helix
MerR family
RPD_3141
SSDB
Ortholog
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GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
HTH_IclR
HTH_17
HTH_23
TetR_N
DUF7269
Motif
Other DBs
NCBI-ProteinID:
ABE40367
UniProt:
Q134X2
LinkDB
All DBs
Position
3496142..3496621
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AA seq
159 aa
AA seq
DB search
MSPPMLDVKRPLTVGEVARRSGVAVSTIHFYEGKGLIAGWRNAGNQRRYTRDTLRRVAIV
KVAQRAGISLSEIATALKDIPLDRVVTAQDWKLLSSKWREMLNERIVRLTQLRDQMDSCI
GCGCLSMTDCPLRNPADQLEATGTGAVLLELEVGTSSST
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctccgatgctcgatgttaaacgtccgctcacggttggcgaggtcgccagacga
agcggcgtcgcggtatcgacgatccacttttacgaaggcaaagggctcatcgcaggctgg
cgaaacgccggtaaccagcgacgatacacacgggacacactgcggcgggtggcgatcgtc
aaagtcgcacaacgagcgggtatttccctctccgagattgcgactgcattgaaggatata
ccgctcgaccgcgtggtgacggcgcaggattggaagttattgtcgagcaaatggcgcgag
atgctcaacgagcgaattgttcgcctgactcagctacgcgatcagatggatagctgtatc
ggctgtggatgcctgtcgatgacagactgcccgttgcgcaacccggccgatcaactcgag
gcaacgggcactggcgctgttctgcttgaactcgaggttggaacgtcgtcgtcgacataa
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