Rhodopseudomonas palustris BisB5: RPD_3147
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Entry
RPD_3147 CDS
T00345
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpd03000
]
RPD_3147
Transcription factors [BR:
rpd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RPD_3147
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
YdaS_toxin
HTH_Tnp_ISL3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ABE40373
UniProt:
Q134W6
LinkDB
All DBs
Position
complement(3499206..3500078)
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AA seq
290 aa
AA seq
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MALTSARMRAVNAVFETGSFAAAARHIGVSQSAIAQLVRELEAAFDVALFERHGASLIPT
ALCRQLYGATCKIQAVEADALSILQQRGEPAGGELRVGLGNSMPGMALIAAFKRLYPKVQ
IAIEIGSWSAIVAAVVEQRVDIGVLPEVPADTRFRREICLQQRVVALCHPGHPLQRRKQV
AIAELTQYPLVFRSRDSSTQRTVDRAFREIGLRPAPSLIVNTREGMLEAVANQLGIGFMW
EQGSSRRDGIARIPVPELDAEVPECIFALAGKKGRLVELFFLARGTPDIA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacatcggcgcggatgcgcgcagtgaacgcggtgttcgagaccggcagcttc
gccgcggccgcgcgccacatcggcgtgtcgcaatcggcgatcgctcaattggtccgcgag
ctggaggccgcattcgatgtggcgctgttcgaacgccacggcgccagtctgatcccgacc
gcattgtgccgccagctctacggcgccacctgcaagatacaggcggtcgaggccgacgcg
ttgtcgatcctgcagcagcgcggcgaaccggcgggcggcgagctccgcgtcggcctcggc
aattcgatgcccggcatggcgctgattgcggcgttcaagcggctgtatcccaaggtgcag
atcgcgatcgagatcggcagttggtcggcgatcgtcgccgcggtggtcgagcagcgcgtc
gatattggcgtgctgcccgaagtgccggcggacacccgcttccgccgcgagatctgtctg
cagcagcgcgtcgtcgcgctgtgccatcccggccatccgctgcagcggcgcaagcaggtc
gcgatcgccgagctgacgcaatatccgctggtgttccggtcgcgcgattcctcgacgcag
cgcaccgtcgaccgcgcctttcgcgagatcggcttgcgtccggcgccgtcgctgatcgtc
aacacccgcgaagggatgctcgaagccgtcgccaatcagctcggcatcggcttcatgtgg
gagcagggctcgagccgacgcgacggcatcgcgcgaatcccggtgccggagctggatgcg
gaagtgccggaatgcatcttcgcgctcgccggcaagaagggccgcctggtcgaactgttc
ttcctggcgcgcggcacgcccgacatcgcgtga
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