Rhodopseudomonas palustris BisB5: RPD_3360
Help
Entry
RPD_3360 CDS
T00345
Name
(GenBank) fumarase
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00020
Citrate cycle (TCA cycle)
rpd00620
Pyruvate metabolism
rpd00720
Other carbon fixation pathways
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
Module
rpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RPD_3360
00620 Pyruvate metabolism
RPD_3360
09102 Energy metabolism
00720 Other carbon fixation pathways
RPD_3360
Enzymes [BR:
rpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
RPD_3360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ABE40584
UniProt:
Q134A5
LinkDB
All DBs
Position
3724921..3726339
Genome browser
AA seq
472 aa
AA seq
DB search
MARKPSAAKSGATRSETDSFGPIEVATDRYWGAQTERSRQNFRIGAERMPIGLVHALGIV
KLAAAETNRDLGLLDQRRAGAIARAAREVIDGSLDDHFPLVVWQTGSGTQTNMNLNEVIA
NRANELLGGERGAKKPVHPNDHVNMSQSSNDSFPTAMHIAAAQAITADLIPGLTTLHDAL
RKKEKAFAKIVKIGRTHTQDATPLTLGQEFSGYAAQVASSLARLKLAVKELYPLAQGGTA
VGTGLNTHPKFAKAFAKRAAVITKLPFVTAPNKFEALASNDAYVSVHGAINAAAAALFKI
ANDIRLLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEALTMVCCQVFGNQTTVTVAG
SQGHFELNVYKPVMAHAMLQSIGLLADAARSFTTHCVDGIRADEGRIGELMQRSLMLVTA
LAPKIGYDNAAKIAKSAHQRGTTLKEEALRLKLVTDAEFDRLVRPDNMTHPG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaacccagcgctgcgaagtccggcgcgacccgcagcgagaccgacagtttc
gggccgatcgaggtcgccaccgaccgctattggggcgcgcagaccgaacgatcgcgacag
aacttccggatcggcgcggagcggatgccgatcggcctcgtgcacgcgctcggcatcgtc
aagctggcggctgccgagaccaatcgtgacctcggcctgctcgatcagcgccgcgccggc
gcgatcgcccgcgccgcacgcgaagtgatcgacggcagcctcgacgatcacttcccgctg
gtggtgtggcagaccggctccggcacccagaccaacatgaacctcaacgaggtgatcgcc
aaccgcgccaacgagttgctcggcggcgagcgcggcgccaagaagcccgtgcatcccaac
gatcacgtcaacatgagccagtcgtcgaacgactcgttcccgaccgcgatgcatatcgcc
gccgcccaggcgatcacagccgatctgattcccgggctgacgacgctgcatgacgcattg
cgaaagaaagagaaggcgttcgccaagatcgtcaagatcggccgcacccacacccaggat
gcgacgccgctgacgctcggacaggaattctccggctacgccgcacaagtggcgagcagc
ctggcgcggctgaagctggcggtgaaggagctatatccgctggcacagggcggcaccgcg
gttggaaccggcctcaacacccaccctaaattcgccaaggcattcgcgaagcgagcggcg
gtgatcaccaagctgccgttcgtcaccgcgccgaacaagttcgaggcgctggccagcaac
gacgcctatgtttcggtccacggcgcgatcaatgctgcggcagccgcgctgttcaagatc
gctaacgacatccggctgctcggctccgggccacgctctggcctgggcgaactgatcctg
ccggagaacgagccgggctcgtcgatcatgcccggcaaggtcaacccgacgcagtgcgaa
gcgctgaccatggtgtgctgccaggtgttcggcaatcagaccacggtcaccgtggcgggc
agccagggccatttcgagctgaacgtgtacaagccggtgatggcccacgcgatgctgcaa
tcgatcggcctgctcgccgacgccgcgcgatccttcaccacccattgcgtcgacggcatc
cgcgcagacgaagggcgaattggtgaattgatgcagcgctcgctgatgctggtcaccgcg
ctggcgccgaagatcggctacgataacgccgcgaagatcgccaaatcagcccatcagcgt
ggaacgaccctgaaagaagaagccttgcggctcaagctggtcacagacgccgaattcgac
cggctggtgcgcccggacaatatgacgcatcctggctga
DBGET
integrated database retrieval system