Rhodopseudomonas palustris BisB5: RPD_3389
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Entry
RPD_3389 CDS
T00345
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00470
D-Amino acid metabolism
rpd00550
Peptidoglycan biosynthesis
rpd01100
Metabolic pathways
rpd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPD_3389
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPD_3389
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPD_3389
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpd01011
]
RPD_3389
Enzymes [BR:
rpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RPD_3389
Peptidoglycan biosynthesis and degradation proteins [BR:
rpd01011
]
Precursor biosynthesis
Amino acid ligase
RPD_3389
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ABE40613
UniProt:
Q133X6
LinkDB
All DBs
Position
complement(3764973..3765962)
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AA seq
329 aa
AA seq
DB search
MRQTILFGGTSKERLVSVASAQALHAALPDAELWFWNDDDLVHVVAADALLAHTRPFEES
FHPAGGGIGPLERALDRAATEQRLLVLGLHGGVAENGELQAMCEMRGVPFTGSGAAASHV
AFDKIAAKRFAAIAGIRAPAGITLDHAERALATYGRLIAKPTRDGSSYGLFFIDAKQDLV
AVRNAAKTEDYLIEPFVCGVEATCGVLEQADGALLALPPVEIVPADGGFDYKAKYLAKST
QEICPGRFTPEVSAVIMDYAVKAHRVMGCRGYSRSDFIVAADGPIFLETNTLPGLTKASL
YPKALKAQGISFDDFLRGQIAIAERSVRR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagacgattctcttcggcggcaccagcaaagagcggctggtgtcggtggcttcg
gcgcaggcgctgcacgcggcgttgcccgacgccgagctgtggttctggaacgacgacgac
cttgtgcacgtcgtggcagccgatgcgctgctcgcgcatacgcggccattcgaggagtcg
tttcatccggcgggtgggggcatcggcccgctcgaacgcgcactggatcgcgcggcgacg
gaacagcgcctgctggtgctcggtctccacggtggcgtcgccgagaacggcgaactgcag
gcgatgtgcgaaatgcgcggcgtgccatttaccggttccggcgccgcggcctctcacgtc
gctttcgacaagatcgccgccaagcgcttcgccgcgatcgccggcatccgcgcgccggcc
ggcatcacgctcgaccatgcggagagggcgctcgcgacgtatggccgcctgatcgccaag
ccgacccgcgacgggtccagctacggcctgttcttcatcgacgcgaaacaggacctggtc
gcggtgcgcaacgcggccaagaccgaggactatctgatcgagccgttcgtctgcggcgtc
gaggcgacttgcggggtgctcgaacaggctgacggcgcgctgctggcgctgccgccggtc
gagatcgtgccggccgacggcggcttcgattacaaagcgaaatatctcgccaaatcgacc
caggagatctgtccgggccggttcacgcccgaggtttccgcggtgatcatggattatgcc
gtgaaggcgcaccgggtgatgggctgccgcggctattcgcgatcggacttcatcgtcgcc
gccgacggcccgatctttctcgagaccaacactttgccgggcctgaccaaagcgtcgctc
tatcccaaagcgctgaaggcccaggggatctcattcgacgacttcctgcgcggccagatc
gcgatcgccgaacgaagcgtccgacgttaa
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