Rhodopseudomonas palustris BisB5: RPD_3396
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Entry
RPD_3396 CDS
T00345
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00470
D-Amino acid metabolism
rpd00550
Peptidoglycan biosynthesis
rpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPD_3396
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPD_3396
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpd01011
]
RPD_3396
Enzymes [BR:
rpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RPD_3396
Peptidoglycan biosynthesis and degradation proteins [BR:
rpd01011
]
Precursor biosynthesis
Amino acid ligase
RPD_3396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
2-Hacid_dh_C
UDPG_MGDP_dh_N
RskA_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABE40620
UniProt:
Q133W9
LinkDB
All DBs
Position
complement(3773615..3775027)
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AA seq
470 aa
AA seq
DB search
MIPVTSFAGQSVAVFGLGGSGLASCHALRAGGAEVIACDDNLDRVVEATQANFITADLRS
LPWANFAALILTPGVPLTHPTPHWSVLKAREAGVEVIGDVELFCRERRRHAPDSPFVAIT
GTNGKSTTTALIAHLMREAGYDTQMGGNIGTAILSLEPPRSGRVHVIEMSSYQIDLTPSL
APTVGILLNVTEDHIDRHGTIEHYAAVKERLVAGVQDGGTAIIGVDDGFGRDAADRLERA
GKQVVRISVKQPLASGITADHETIRSSAGGASREIARLGGIGSLRGLHNAQNAAAASAAA
LALGVSADALQKGLRSFPGLAHRMEQVGRQSSGEGATLFVNDSKGTNADATAKALSSFGE
IFWIAGGKPKTGGIESLAEYFPRIRKAYLIGEAAEEFAATLEGKVAYEISETLDNAVAAA
ARDAAASGLAEPVVLLSPACASFDQFRNFEIRGTRFRELVTALDGVKPVA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgtaacctccttcgccgggcagtccgtggcggtgttcgggctcggcgggtcg
gggctggcgagctgccacgcgctgcgcgccggcggcgccgaagtgatcgcatgcgacgac
aatctcgaccgcgtggtggaagcgacgcaggcaaatttcatcaccgctgacctgcgcagt
ttgccgtgggccaatttcgctgcgctgatcctgacgcccggcgtgccgctgacgcatccg
acgccgcattggagcgtcctgaaggcacgcgaggccggcgtcgaagtgatcggcgatgtc
gagctgttctgccgcgaacggcggcggcatgcgccggactcgccgttcgtcgccatcacc
ggcaccaacggcaagtcgaccaccaccgcgctgatcgcgcatctgatgcgcgaggccggt
tacgacacccagatgggcggcaatatcggcaccgcgattctgtcgctggagccgccgcgt
agcggccgcgtccatgtgatcgagatgtcgtcctaccagatcgatctgacgccctcgctc
gctcccaccgtcggtatcctgctcaacgtcaccgaagaccacatcgatcgccacggcacc
atcgagcactacgccgcggtgaaggagcggctggtcgccggcgtgcaggacggcggcacg
gcgatcatcggcgtcgatgacggcttcggccgcgacgccgccgaccggctggagcgcgcc
ggcaagcaggtggtgcggatttcggtgaagcaaccgctggcctccggcatcaccgccgat
catgagaccattcgcagctcggccggcggcgcttcacgcgagatcgcgcggctcggcggc
atcggttcgctgcgcggcctgcacaacgcccagaacgccgccgcggcgtcggcggctgca
ttggcgctcggcgtcagcgccgatgcgttgcagaaggggctgcgcagcttcccgggcctc
gcgcaccggatggagcaggtcggccggcaatcgagcggtgagggcgccacgctgttcgtc
aacgattccaagggcaccaacgccgacgccaccgccaaggcgctgtcgtcgttcggcgag
atcttctggatcgccggcggcaagccgaagaccggtggcatcgaaagcctcgccgagtac
ttcccgcgcatccgcaaggcgtatctgatcggcgaagcggccgaggaatttgccgcgacg
ctggagggaaaggtcgcttacgagatcagcgagacgctggacaacgccgtggcggctgcg
gcgcgcgatgcagcggcatcgggattggccgagcccgtggtgctgctatcgccggcctgt
gcttcgttcgaccagttccgcaatttcgagatccgcggcaccaggttccgcgaactggtg
acggcactggacggtgtgaaacctgtggcgtga
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