Rhodopseudomonas palustris BisB5: RPD_3398
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Entry
RPD_3398 CDS
T00345
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00300
Lysine biosynthesis
rpd00550
Peptidoglycan biosynthesis
rpd01100
Metabolic pathways
rpd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPD_3398
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPD_3398
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPD_3398
Enzymes [BR:
rpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RPD_3398
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABE40622
UniProt:
Q133W7
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Position
complement(3776281..3777720)
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AA seq
479 aa
AA seq
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MSKPPLWTSDAMAEAMRAAASGSLPRDVFGISIDSRTLAPGDAYFAIKGDVHDGHDFVAA
ALNAGAALAVVERAQRAKFAADAPLLVVDDVLDGLRELGRAARARLDAKIIAVTGSVGKT
STKEALRGVLGAQGETHASVASFNNHWGVPLSLARCPADVRYAVFEIGMNHAGEIEPLVK
MVRPHLVIITTVEPVHLEFFSGIEAIADAKAEIFAGLVPGGTAVLNRDNAMFKRLTDSAR
KAGVGRVVSFGADVEADARLLDVALHADCSAVHATIFGRDVTYKLGIPGRHIAMNSLAVL
AAAETVGADLALAALALSHVQPAAGRGVRRALEFGQSEATLIDESYNANPASMVAALGVL
GQVPVGPQGRRIVVLGDMLELGPAGPELHRDLAESVRNNAIDLVFCCGPLMRNLWDALSS
GKRGGYAETAAALESQVVAAIRAGDVLMIKGSLGSRMKTIVTALEKRFPGKTARDDAAV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccaccgctgtggacttcggatgcgatggcggaggcgatgcgcgccgccgcg
agcggctcgctgccgcgcgacgtgttcggcatttcgatcgacagccgcacgctggcgccg
ggcgatgcgtatttcgcgatcaagggtgacgtccatgatggtcacgatttcgtcgccgcc
gcgctgaatgccggcgcggcgctggcggtggtggaaagggcgcagcgcgccaagttcgcc
gccgacgcgccgctgctggtggtcgacgacgtactcgacggattgcgcgagctcggccgc
gcggcgcgggcgcggctcgacgccaagatcatcgcggtgaccggctcggtcggcaagacc
tcgaccaaggaagcgctgcgcggcgtgctcggggcgcaaggcgagacccacgcttcggtg
gcgtcgttcaacaatcactggggcgtgccgctgtcgttggcgcgctgtccggcggacgtg
cgctacgcggtgttcgaaatcggcatgaaccacgcgggtgaaatcgaaccgctggtgaag
atggtgcgaccacatctggtgatcatcaccacggtggagccggtgcacctcgagttcttc
tccggcatcgaagcgatcgccgacgccaaggcggaaatcttcgctgggctggtgcccggc
ggcacggcggttctcaatcgcgacaatgcgatgttcaagcggctcaccgacagcgcccgc
aaggccggcgtcggtcgcgtcgtatcgttcggtgccgatgtcgaggccgatgcgcggctg
ctcgacgtcgcgttgcacgccgattgctccgcggtgcatgcgacgattttcggccgcgac
gtcacttacaagctcgggattcccgggcggcatatcgcgatgaattctctggccgtattg
gccgcggcggaaactgtcggcgctgatctcgcgctggcggcgctggcgctgtcgcacgtc
cagcccgccgccggccgtggcgtccgccgcgcgctcgaattcgggcaaagcgaggccacg
ctgatcgacgagagctataatgccaatccggcgtcgatggtggcggcgctgggcgtgctc
ggccaggtcccggtcggtccgcagggtcggcggatcgttgtgctcggcgacatgctggaa
ctcggcccggccgggccggagttgcatcgcgacctcgccgagtcggtgcggaataacgca
atcgatctggtgttctgctgcggtccgctgatgcgcaatttgtgggacgccctttcctca
gggaagcgagggggctatgcagagaccgcggccgcgctcgaatctcaggtggttgcggcg
atccgtgccggcgacgtgctgatgatcaaaggctcgctcggctcgcgcatgaaaacgatt
gtcaccgcgctcgagaagcgctttcccggcaagaccgcgcgcgatgacgctgcggtgtaa
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