Rhodopseudomonas palustris BisB5: RPD_3553
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Entry
RPD_3553 CDS
T00345
Name
(GenBank) short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00071
Fatty acid degradation
rpd00362
Benzoate degradation
rpd00650
Butanoate metabolism
rpd01100
Metabolic pathways
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
rpd01212
Fatty acid metabolism
Module
rpd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RPD_3553
09103 Lipid metabolism
00071 Fatty acid degradation
RPD_3553
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RPD_3553
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RPD_3553
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
ApbA
DAO
Pyr_redox
NAD_binding_2
F420_oxidored
TrkA_N
NAD_Gly3P_dh_N
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ABE40776
UniProt:
Q133G3
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All DBs
Position
complement(3950655..3952754)
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AA seq
699 aa
AA seq
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MSEVVTRERHDVIAVVTVDSPPVNALSAAVRRGILDNVNAAVADPEVQAIVLTCAGRTFI
AGADITEFGKPAQPPSLNDVIAALENSPKPTIAAIHGTALGGGLEVALGCHFRVAVKDAR
LGLPEVKLGLLPGAGGTQRLPRAVGPELAVQMIVGGNPIGAADALKHGLIEEVVEDRVAG
GVAFARKVLAEKRPTRRLRDDDSKLAAARADRSIFTNAVASMTKKARGLEAPFACADAIG
AAIDLPFEQGLAKEREGFLKLVVSDQSKAQRYAFFAEREAAKVDGVPDGAKPRPVARVAI
IGAGTMGGGIAMSFANAGIPVTLIETGKEQLDRGMGIMQKNYEATAARGGIPADAPAKRM
GLITGVVGLENVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNVDEIAA
TTKRPQDVLGMHFFSPANVMKLCEIVRGAKTAPDALLTAVSIAKKIAKVPVVAGVCDGFI
GNRMLAARSKQSEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRQDRGIK
SEIADALCEAGRFGQKTGKGYYKYEQGSRSPLPDPEVETLINDTLTKLGLKRREVSDEEI
LERMVYPMINEGARILEEKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERL
AFYAKATNDPSLEPAPLLKRLAEEGKTFASLAQQSKAAA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcgtcacgcgcgagcggcatgatgtgattgcggtcgtcactgtcgacagc
ccgccggtcaacgcgctgagtgcggctgttcgccgcggcattttggacaacgtcaacgcc
gccgtcgccgatccggaagtacaggcgatcgtgttgacctgtgcggggcgcaccttcatc
gccggcgccgatatcaccgaattcggcaagccggcgcagccgccgagcctcaacgacgtc
atcgccgcgctggagaattcgccgaagccgacgatcgccgcgatccacggcaccgcgctg
ggcggcggtcttgaggtcgcgctgggttgccatttccgcgtggcggtcaaggacgccagg
ctcggcctgccggaggtgaaactcggcctgctgcccggcgctggcggaacccagcggctg
ccgcgcgcggtcggtcccgaactcgcagtgcagatgatcgtcggcggcaatccgatcggc
gccgctgatgcgttgaagcacgggttgatcgaggaggtcgtcgaggaccgcgtcgccggc
ggcgtagccttcgcgcgaaaggtgctggccgagaagcgtccgacgcgccggctgcgcgac
gacgacagcaagctcgctgccgcccgagccgatcgttcgatcttcaccaatgcggtcgcg
tcgatgaccaagaaggcgaggggcctcgaggcgccgttcgcctgtgccgatgcgatcggc
gcagcgatcgacctgccgttcgagcagggtctggcgaaggagcgcgaggggttcctcaag
ctcgtggtcagcgatcagtcgaaggcgcagcgctacgcgttcttcgccgagcgcgaagcc
gccaaggtcgacggcgtgccggacggcgccaagccgcgtccggtggcgcgcgtcgcgatc
atcggcgccggcacgatgggcggcggcatcgcgatgtcgttcgccaatgccggcattccg
gtgaccctgatcgagaccggcaaggaacagctcgatcgcggcatgggcatcatgcagaag
aactacgaagccacggcggcgcgcggcggcatcccggccgacgcgccggcgaagcgcatg
ggtctgatcaccggcgttgtcggcctcgagaacgtcaaggacgccgatctgatcatcgag
gcggtgttcgagacgatggcggtgaagaaggaagtcttcaccgcgctcgacgcctacgcc
aagcccggtgcggtgctcgcttccaacacctcctatctcaatgtcgacgagatcgccgcg
accaccaagcgtccgcaggacgtgctcgggatgcacttcttctcgccggccaatgtgatg
aagctttgcgaaatcgtccgcggcgccaagaccgcgccggacgcgctgctcacggcggtg
tcgatcgccaagaagatcgccaaggtgcctgtggtggccggcgtttgcgacggcttcatc
ggcaaccggatgctcgcggcccgcagcaagcagtccgagaagctattgttcgagggcgcg
ctgccgcagcaggtcgacgccgtcgtcaccaaattcgggatgccgatgggcccgttcgcg
atgggcgatctcgccggcctcgacatcggctggcgctcgcgccaggaccgcggcatcaag
tcggaaatcgcggatgcgctgtgcgaggcgggccgcttcggccagaagaccggcaagggc
tactacaaatacgagcagggatcgcgctcgccgctgccggatcccgaggtcgagaccctg
atcaacgacacgctgaccaagctcggcctgaagcgccgcgaggtcagcgacgaggaaatc
ctcgaacgcatggtctatccgatgatcaacgagggcgcgcgtatcctcgaggagaagatc
gcggcgcggccgagcgacatcgacgtggtctggctttacggctacggctggccgatctat
cgcggcggcccaatgcactacgccgactcggtcggcctgaagcacatcgccgagcgcctt
gcattctacgccaaggccaccaacgatccgtcgcttgagccggcgccgctgctgaagcgt
ctcgccgaggagggcaagaccttcgcgtcgctggcgcagcagtccaaggcggcggcgtga
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