Rhodopseudomonas palustris BisB5: RPD_3564
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Entry
RPD_3564 CDS
T00345
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K16080
high affinity Mn2+ porin
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_3564
Transporters [BR:
rpd02000
]
Other transporters
Pores ion channels [TC:
1
]
RPD_3564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABE40787
UniProt:
Q133F2
LinkDB
All DBs
Position
3963828..3966002
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AA seq
724 aa
AA seq
DB search
MLRGFAPAFPSASNRPRFVVLSLRCGEILPSPLAAAANGPTLCYGTANSSAGVIGRVRKT
VIIGILAGVVTTPAAGGGIVVKAPAAGGPAVFDWNGFYIGGHFSYVAGRSDWTAQPAGVS
GTIDLFDAFDAFKGTGSYTLGLQAGYNVLLPSRWLLGLEADLTSPNRIGGNASISPPTGT
IGGHDHQTQLAGTVRGRLGYALDGWLPYATAGFAWSYDRLRWPSEAAATEETALLWRLGW
AAGAGVELPLSPAWTARVEYLATGFGRDTARFPIAGHQIESDALIHAVRLGLNYRLGEDL
AKSDVFTKGIDALELDRFAVHGQATLTWQYAPPFRSPYRGQNSLLPNQARETFDMTFYVG
TKLWDGAEFWVNPEIDQGFGLSGTFGVAAFPSAESYKVGSDYPYARLPRYFVRQTLDLGG
ATETIQGGPNQFAGKQSSERMVITAGKFSVGDIFDVNRYAHDPRVDFLNWGLADATTFDY
AADAWAFTYGTAVEWYTGPWTVRGGVFDLPVTPNNTDLDPSFGQFQMVGELEHRHQFWGL
SGKLLVTGFLNRARLGRFDEAVRRGQATGTTPEIADVRRYTSKTGVSASLEQQLTPDIGL
FARAGLSSPNLETNAFTDSDRALSAGLSVSGRMWGRADDTLGLGGLINHISAARIAYLDA
GGLTAIIGDGRLPNSGNERVIEAYYSLPVLSWRLTADYQFIANPAFNRDRGPVHAIATRL
RTQF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgggttcgcgccggcctttccctcggcttcgaaccggccacgatttgtggtt
ttgtcgctacgttgtggggaaatcctgccctcgccgctcgctgcggccgctaacggtccg
acattgtgttacgggaccgccaattcgagtgctggagtgattggtcgcgtgcgaaagaca
gtcatcattggaatcctggccggcgtcgtgacgacgccggcagcgggtggcgggattgtc
gtgaaggcgcccgccgccggcggtccggccgtgttcgattggaacggattctacatcggc
ggccatttcagctacgtcgccggccgttccgattggacggctcagccggccggcgtcagt
ggcacgatcgacctgttcgatgcgttcgatgcgttcaagggcaccggtagctacacgctc
ggtctgcaagccggctacaatgtgctgctgccgtcgcgctggctgctcggcctcgaagcc
gatctgacctcaccgaaccggatcggaggcaacgccagcatcagcccgccgacaggcacg
atcggaggacacgaccaccagacccagctggccggaacggtgcgcggccggctcggctac
gcgctggacggctggctgccctacgccaccgccggcttcgcctggagctatgaccggctg
cgatggccgtccgaggcggcggcgaccgaggaaaccgcgctgctgtggcggctcggatgg
gccgccggagcgggcgtggagctgccgttgtcgccggcctggacggcgcgcgtggaatat
cttgcgaccggctttggacgcgacaccgcccgcttcccgatcgccggtcatcaaatcgaa
tccgacgcgctgatccacgccgtccggctcggcctgaactatcggctgggcgaggacctc
gccaagtccgacgtgttcaccaagggcatcgacgcgctggagctcgaccgcttcgccgtc
cacggccaggccacgctgacctggcaatatgcgccgccgttccgttcgccctatcgcggg
cagaacagcctcttgccgaaccaggcgcgggaaaccttcgacatgacgttctatgtcggc
acgaaattgtgggacggcgcggaattctgggtcaatccggagatcgaccagggcttcgga
ctgagcggcaccttcggcgtggcggcgtttccgagcgcagaatcctacaaggtcggctcc
gactatccctatgcgcggctgccacgctacttcgtccgccagaccctcgacctcggcggc
gcgaccgagacgatccagggcggccccaaccagtttgccggcaaacagtcctccgagcgg
atggtgatcaccgccggcaagttttcggtcggcgacattttcgacgtcaaccgctacgcc
cacgatccccgcgtcgacttcctcaattggggcctggccgacgccaccaccttcgactat
gccgccgacgcttgggccttcacgtatggcaccgcggtcgagtggtacaccggtccatgg
acggtgcgcggcggcgtgttcgatctgccggtgacgccgaacaacaccgacctcgatccg
agcttcggccagttccagatggtcggcgagctcgaacaccggcaccagttctggggtctt
tccggcaagctgctcgtcaccggctttctcaaccgtgcccggctcggtcggtttgacgag
gcggtgcggcgggggcaggcgaccgggacgacgcccgagatcgccgacgtgcggcgctac
accagcaagaccggcgtgtcggccagcctggagcagcaactcacgcccgacatcgggctg
ttcgcccgcgccggcctcagcagcccgaacctcgaaaccaacgccttcaccgattccgac
cgggcgctgtccgccggcctgtcggtgtccgggcggatgtggggacgtgcggacgacacc
ctcgggctcggcggcttgatcaaccacatctcggcggcgcggatcgcctatctcgacgcc
ggcggcctgaccgcgatcatcggtgacggccgactgcccaattccggcaatgagcgggtg
atcgaggcctattacagccttccggtgctgtcctggcggctcaccgcggactatcaattc
atcgccaacccggcgttcaaccgcgaccgcggtccggttcacgccatcgccacccggctg
cgaacgcagttttga
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