Rhodopseudomonas palustris BisB5: RPD_3580
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Entry
RPD_3580 CDS
T00345
Name
(GenBank) Radical SAM
KO
K22705
hopanoid C-2 methylase [EC:2.1.1.-]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RPD_3580
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GFIT
Motif
Pfam:
DUF4070
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABE40803
UniProt:
Q133D6
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All DBs
Position
complement(3987142..3988725)
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AA seq
527 aa
AA seq
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MRAESGQTSRRILCVFPRYTKSFGTFQNSYPLMDGVAAFMPPQGLLVIAAYLPEDWSVRF
IDENIRAATPEDFGWADAVFVSGMHIQRQQMNDICKRAHTYDLPVAIGGPSVSACPDHYP
SFDYLHVGELGDATDQLIAKLAHDVTRPKRQIIFTTEDRLDMTLFPVPAYELAECSKYLL
GSIQYSSGCPYQCEFCDIPGLYGRNPRLKTPEQIIIELDRMVECGIRGSVYFVDDNFIGN
RKAALDLLPHLAEWQKRTGFALQLACEATLNIAKRPEILSLMREAYFTTIFCGIETPDPV
ALKAMQKDHNMMVPILEGVRTISSYGIEVVSGIILGLDTDTPETGEFLMQFIAQSQIPLL
TINLLQALPKTPLWDRLESEGRLIHDDGRESNVDFLLPHDQVVAMWKDCMARAYEPEALL
ARYEYQIRNAYATRLHPDTPQRSSKANIKRGLIMLRNIIWQIGIRGDYKLAFWKFAVPRI
LRGDIENLLGVMVVAHHLIIYAREASRGQANASNYSIRLREASVPAE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgaatccggccaaaccagccgtcgcattctgtgcgtcttcccgcgttacacc
aagtcattcggcacgtttcaaaactcctatccgctgatggacggcgtggcggcgttcatg
ccgccgcaaggcctgctggtgatcgccgcctatctgccggaagactggtcggttcgcttc
atcgacgaaaacatccgtgcggcgacgcccgaggatttcggctgggccgatgcggtgttc
gtcagcggcatgcacatccagcgccagcagatgaatgacatctgcaaacgcgcccacacc
tatgatctgccggtagcgatcggcgggccgtcggtcagcgcctgcccggatcattacccg
agcttcgattatctgcatgtcggcgaactcggcgacgccaccgaccagctgatcgcgaag
ctggcgcacgacgtcacgcggccgaagcggcagatcatcttcaccaccgaagatcgcctc
gacatgacgctgtttccggtcccggcctatgagctggcggaatgcagcaaatatctgctc
ggcagcatccagtattcctcgggctgcccgtatcagtgcgaattctgcgacattccgggc
ctgtacggccgcaacccgcggctgaagacgccggagcagatcatcatcgagctcgaccgg
atggtcgaatgcggcatccgcggctcggtgtatttcgtcgacgacaatttcatcggcaac
cgcaaggcggcgctcgatctgttgccgcatctggcggaatggcagaagcgcaccggcttc
gcgctgcagctcgcctgcgaggcgacgctgaacattgccaagcggcctgaaatcctcagt
ttgatgcgcgaggcgtatttcaccaccatcttctgcggcatcgaaacgccggatccggtt
gcgctcaaggcgatgcagaaggaccacaacatgatggtcccgatcctcgagggcgttcgc
acgatctcaagctacggcatcgaagtggtgtcgggcatcatcctcggcctcgacaccgat
acgccggagaccggcgaattcctgatgcagttcatcgcgcagtcgcagatcccgctgctc
accatcaacctgctgcaggcgctgccgaagacgccgctgtgggaccggctggagagcgag
ggccggctgatccatgacgacggccgcgagtccaatgtcgacttcctgctgccccacgat
caggtggtggcgatgtggaaggattgcatggcgcgcgcctacgagcccgaagcgctgctg
gcgcgctatgaataccagatccgcaacgcctacgcgacgcgcctgcatccggacacgccg
cagcgctcctcgaaggccaacatcaagcgcggcctgatcatgctgcgcaatatcatctgg
cagatcggcattcgcggcgactacaagctcgccttctggaaattcgcggtgccgcggatc
cttcgtggtgacatcgagaacctgctcggcgtcatggtggtcgcgcatcatctgatcatc
tacgcccgcgaggcctcgcgcggccaggctaacgcgtcgaactattcgatccggctgcgc
gaagcctcggtgccggcggagtag
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