Rhodopseudomonas palustris BisB5: RPD_3630
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Entry
RPD_3630 CDS
T00345
Name
(GenBank) DEAD/DEAH box helicase-like
Organism
rpd
Rhodopseudomonas palustris BisB5
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ABE40853
UniProt:
Q132Y6
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All DBs
Position
4049364..4052885
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AA seq
1173 aa
AA seq
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MPTTPETIAADIEEAATAGFRGNLLARGQARAIIWRDGALPAEAPAFAPQLSYDLHSYAY
ALLGLALRLREIGGDAARARIAFEQAATALEAVISKGDRQEVDRDFHFVMAAASYHLAHL
SARAYSLLATVDADENFSRIERALAQLMRRNFEALRAGVLDYRASATGSDARIAAEFQAR
LDQPEGAGDPEARGEFIFEGLDVALTDAFLSAISMFVLALDRGDRSLVDQALARLRENLS
ICSELNLLPQWWAHRLAIHLLSDLWSNTFHERVPRQPTGGEAADWPRLRQLFIALLQRRP
KAEIDLWPSQLEAAERAVDQGDDLVVSLPTSAGKTRIAELCILRCLAGGKRVVFVTPLRA
LSAQTETTLQRTFGPLGKTISALYGSIGVSGFDEDAIRERDIVVSTPEKLDFALRNDPSL
LDDVGLLVFDEGHMIGPNEREIRYEVQIQRLLRRRDAHARRIVCLSAILPDGDQLDDFAA
WLRRDHPGGLIKNDWRPTRLRFGEVIWTPASASARLNLRVGDERPWVQRFLTGAAPPLFI
PPKRLRTKVFPGNQRELCLATAWRLVEDGQTVLIFCPERRGVEPFADVVVDLHERGALRS
LLEVDPGVLSTAITLGEEWLGHDSAILKCLRLGVALHHGALPTAYRKEVEQLLRANVLKV
TVSSPTLAQGLNLSATAVVMFSLHRAGELIEISEFKNVIGRAGRAYVDVEGIVLFPMFDE
IVKKRRSWEALITDLGAREMESGLVRLVSALLLRMRARVGGDLNQLIEYVVNSAAAWVFP
EVQNETPKDRERALADWNRHVATLDTAILSLIGENEIADHEVEAALDHILQSSLWHRRLL
RQNDQVRHLLKAGLLSRSRLIWSQSTSTRRRGYFLAGVGLTTGQALDAIAADANLLLLQA
NAGIGAGDAGAAIDAVTRLAELVFTFYPFTPDPWPGNWRDILRSWLLGQPLGALAAGQAS
DTLQFIEGSLVYRLPWAMEAVRVRAAANGDTVGLFGLTLEDHELSLAVLSVETGTMNRSA
SILIQAGFTSRLAAIKAVTDSGATFQNGGQLRAWLSSEALAAWNALPDWPTAETKAMWTE
FTQGFTPRASNIWSDRRYWASATWYGVPPLPGVPVQLHDWNGQRLVLSADCTPLGTLRNA
LNANRKGLIQATVSPTAGRIDLVYIGPDDLSAT
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaactcctgaaacgatcgctgcagacatcgaggaagctgcgaccgccggattc
cgaggaaacctacttgctcgcgggcaggcccgcgcgatcatctggcgcgacggtgccctg
ccggccgaagcgccagccttcgccccacaactgagctacgatctccattcctatgcctat
gctcttctagggcttgctctccgtctccgtgagatcggcggcgatgcggcccgggcccgg
atcgcgttcgagcaggcggccaccgcccttgaagccgtaatctcgaaaggggaccgtcag
gaggtcgaccgagacttccacttcgtgatggcggcagcgagctatcatcttgcgcatctt
tcggcgcgcgcatattcgcttcttgcgaccgtcgatgccgacgagaatttttcgcgcatc
gaaagggcgcttgcacagttgatgcggcgcaatttcgaagccctgcgtgccggtgtgctc
gattaccgagcttcggcgacgggctccgatgcccggattgccgccgaattccaggcacga
ctggatcagcctgaaggcgccggcgatccagaggcccgcggcgagttcatctttgagggt
ctggacgtggccctgaccgacgcattcctttcggcgatatcaatgttcgttcttgcactg
gaccggggtgaccggtcgcttgtagatcaggcgttggcccggctccgagaaaacctctcg
atatgcagcgaactgaacctcctgccgcagtggtgggcgcaccgcctggccatccatctc
ctgtccgacctctggtccaatactttccacgaaagagttccgcgccaaccgaccgggggc
gaagccgctgactggccacgcctccggcaactcttcatcgctctgctgcagcggcgaccc
aaagccgaaatcgacctgtggccgtctcagctcgaagcggcggagcgcgccgtcgatcag
ggcgacgacttagtggtttcccttccgacgagcgcagggaagacacggatcgccgagctc
tgcattttgcggtgcctggctggcggaaaacgtgtggttttcgtgacgccgcttcgggca
ctttccgctcaaacagaaacgacactgcagagaactttcggtccgttgggaaagacgatt
tcagccctgtacggtagtattggtgtcagcggcttcgacgaagacgctattcgggaaaga
gacatcgttgtctcgaccccggaaaaactagatttcgcgctccgcaacgatccttcattg
ctcgacgatgtcggacttctggtctttgacgagggccacatgatcggccccaacgagcgg
gagatacggtatgaggttcaaatccagcgcctccttcggcgccgagacgcgcatgcacgc
cgcatcgtttgcctttcagcgatacttccagatggcgaccagctcgacgacttcgctgct
tggctgcggcgcgaccatccgggcggcttgatcaagaatgactggcggccgacccgactg
cgcttcggggaagtcatctggaccccagcttcggcatcggcaaggttgaacctgcgcgtc
ggcgacgagcggccttgggtgcagcgcttcttgaccggggccgcgccgccgcttttcatc
ccgcccaagcgcttgcgtactaaagtctttccgggaaatcaacgtgaactctgtctcgca
acagcatggcggctcgtcgaagacgggcagaccgtcctgatcttctgccccgagcggagg
ggcgtggagccgttcgcggacgtcgtcgtcgacctgcatgagcgcggcgctctccgctcg
ttgctggaggtcgatccaggagtgctcagcacggcgatcacgctcggcgaggagtggcta
ggccacgatagcgcaatcttgaagtgcctgcgcctcggcgtggcgctacatcatggagcg
ttgccgaccgcatatcgcaaagaggtcgagcagttgctgcgcgcgaacgtgctcaaggtc
accgtctcgtcgcctacgctggcgcaaggccttaacctttcggccacggctgtggtgatg
ttctccctccatcgcgccggagagctaattgagatctccgaattcaagaacgtcatcggc
cgagctggccgtgcttatgtcgatgtggaagggatcgtgctctttccgatgttcgacgag
atagtgaagaagcgacgaagctgggaagccctcatcactgatcttggcgcgcgtgaaatg
gagagcggacttgtacgcctcgtcagcgccctcttgttgcgaatgcgcgctcgggttggc
ggggacctgaatcaactcatcgaatatgtggtcaacagcgctgcagcatgggtctttccg
gaggtacagaatgagacgcccaaggaccgtgagcgtgcgctcgcggactggaatcggcac
gtcgcgacgctcgacacagccatcttgagccttatcggcgagaacgaaatcgctgaccat
gaagttgaggctgcgctggaccacatactgcagtcctccctctggcaccgccgccttctt
cgccagaacgatcaggtgcggcacctattgaaggctggccttctctcgcgtagtcgactc
atctggagtcaatcgacatccacgcgtcgccgggggtatttcttggccggcgtcggactg
actaccggccaagcgctcgatgcgatcgcggcggatgccaacttactgctgttgcaggct
aacgccggcatcggcgccggcgacgccggcgcggcgatcgatgcggtcactcgcctcgcc
gaactggtcttcacgttctatccgttcactcccgatccctggcccggcaactggcgcgac
atactccgttcctggttgctaggccaaccccttggtgcgctcgccgcaggccaagcttcg
gacaccctccagttcatcgagggaagcctcgtttaccgtcttccatgggccatggaagcg
gtgcgggtccgcgcggcggcgaacggggatacggtcggtttgttcggtcttaccctcgaa
gaccatgagctgagcctagctgtcctctccgtggaaactggcacgatgaatcgttcggca
tcgattctcatccaagcaggattcacgtcgaggctggccgcgatcaaagcggtgaccgat
agcggcgccacatttcagaacgggggacagctccgagcttggctcagctcagaggccttg
gcggcatggaacgcgctgcccgactggccgacggctgagaccaaagcgatgtggaccgag
ttcactcagggattcactccacgcgcgagcaacatttggagcgaccgccgatactgggca
agtgccacttggtacggcgttccgccacttccgggcgtgcccgtgcagcttcacgattgg
aatggtcagcggctggtgctttcagcagattgtacgcccttggggacattgcggaatgca
ctgaacgcgaacaggaaagggctcattcaggcaacggtgtcaccgaccgccggaaggatc
gatctggtgtacatcgggccagatgacctctctgcgacctag
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