Rhodopseudomonas palustris BisB5: RPD_3759
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Entry
RPD_3759 CDS
T00345
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00900
Terpenoid backbone biosynthesis
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RPD_3759
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rpd01006
]
RPD_3759
Enzymes [BR:
rpd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RPD_3759
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RPD_3759
2.5.1.29 geranylgeranyl diphosphate synthase
RPD_3759
Prenyltransferases [BR:
rpd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RPD_3759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ABE40980
UniProt:
Q132K9
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All DBs
Position
complement(4196484..4197350)
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AA seq
288 aa
AA seq
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MDVTNRIERALTEALSQADLAGCPPRLAAAMRSAVFPRGARVRPRLCHSVALACGEDNPA
ATEAAGAALELMHCASLVHDDLPCFDGADIRRGRPSVHKAFGEPLAVLTGDALIVLAFQT
IARVNCAPDRLLKLTQVVGGAVGVPLGIVAGQAWECESEINLAHYHRSKTGALFVAATAA
GAASAGADPEPWRLVGEKIGEAYQVADDLRDAAADEDEIGKPVGQDIAHDRPSAVREMGI
DGAVFYLKSLVRGAIEAMPPCANGNELRSLIMSEATRLVPAKLAQSAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaccaatcggatcgagcgtgctcttaccgaagcgctcagccaggcagatctg
gcaggatgcccgcctcgcttggcggctgcaatgcgcagtgcggtgttcccgcgcggcgct
cgggtccggccccggctctgccacagcgtggctttggcctgcggcgaggacaatcccgcc
gcaacggaagccgccggcgcggcacttgaattgatgcattgcgcctcgctggttcacgac
gatctgccctgcttcgatggcgctgatatccgccgcggccgtccctcggtgcacaaggcg
ttcggcgagccgctcgcggtgctgacgggagacgcgctgatcgtgctggcgttccagacc
attgcccgcgtcaattgcgcgccggaccggctgctgaagctcactcaggtcgtcggcggc
gccgtcggcgtgccgctcggcatcgtcgccggtcaggcgtgggaatgcgaatccgaaatc
aatctcgcacattatcaccgctccaagaccggcgcgttgttcgtcgccgcgactgcggcg
ggtgcggcctcggccggcgccgatccggagccgtggcggctggtaggcgagaagatcggc
gaagcctatcaggtcgccgacgatctgcgcgacgccgccgctgacgaggacgaaatcggc
aagccggtcggtcaggatatcgcccatgatcgcccgagcgcggtgcgcgaaatgggcatt
gacggcgcggtgttctatctgaagtcgctggtccgcggcgcaatcgaggcgatgccgccc
tgcgccaacggcaacgaacttcgctcgctgatcatgtcggaggccacgcgcctggtgccg
gcgaagctggcgcaatccgcggcgtga
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