Rhodopseudomonas palustris BisB5: RPD_3940
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Entry
RPD_3940 CDS
T00345
Name
(GenBank) Type IV secretory pathway VirD4 components-like
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RPD_3940
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
DUF87
TrwB_AAD_bind
Prot_ATP_ID_OB_C
PALP
Motif
Other DBs
NCBI-ProteinID:
ABE41161
UniProt:
Q131S8
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Position
4379671..4380315
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AA seq
214 aa
AA seq
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MRQEGAGRTPRWEGCRCHAVHGTARFAERDDLNKAKLVRNRPPGEFPEGLMVGWWFEDMY
DFAPIEYAGELHQLIVAGTGGGKFTTGIATTLLGSRLDDSTVVVVDPKGEIAQLAGPYFQ
KALAEKATVHLLDPWDLCGTGQTSVLNVIDQIDRSNPNHVDDARALADAMVIPSGGENTH
WVLFAFKFGAEAQDGRHTSCWHKPHNKQVEQLPT
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtcaggaaggggcgggaaggacgccccgttgggaggggtgtcgctgccatgctgta
catgggaccgcccgtttcgcagaacgggacgatctgaacaaagccaagctcgttcgcaac
cgcccgcccggggagttccctgaaggcctaatggtcggctggtggttcgaggatatgtat
gacttcgccccgatcgaatacgcgggcgaactgcaccaattgatcgtggcaggcacgggc
ggcggcaaattcacgactggcattgccactacgctgctgggcagccgcctcgacgacagt
acggtggtggtcgtggacccgaagggcgaaatcgcccaactggccggaccgtactttcaa
aaggcattggcggaaaaagccacggtgcaccttctggacccctgggacctgtgtggcacg
ggccagaccagcgtcttgaatgtcatcgatcaaatcgaccgcagcaatccaaaccacgtc
gacgacgcccgagcgcttgccgatgccatggtcataccgtctggcggcgagaacacgcat
tgggtgttattcgcgttcaaattcggagccgaagcacaggatggaaggcatacttcttgc
tggcacaaaccccacaataaacaagtcgagcaacttccaacttag
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