Rhodopseudomonas palustris BisB5: RPD_3962
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Entry
RPD_3962 CDS
T00345
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RPD_3962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpd03016
]
RPD_3962
Enzymes [BR:
rpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RPD_3962
Transfer RNA biogenesis [BR:
rpd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RPD_3962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
DUF7411
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
ABE41181
UniProt:
Q131Q8
LinkDB
All DBs
Position
complement(4409165..4410373)
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AA seq
402 aa
AA seq
DB search
MTESMLNSLDLEGRPQDTRVVVAMSGGVDSSATAALLKSQGYDVVGITLQLYDHGAATHR
KGACCAGQDIHDARAVAERIGIPHYVLDYESRFRESVIDSFADSYALGETPVPCIECNRS
VKFRDLLATARELGASALATGHYVSSRRLDDGSRALICAADRDRDQSYFLFATTREQLDF
LRFPLGDMTKPQTRELARQFGLSVADKHDSQDICFVPTGRYTDVVERLKPNAMEPGEIVD
LNGHVLGSHPGIVHFTVGQRRGLGIASRAPLYVLRLDAAHRRVVVGPREALRMERIVLRD
VNWIGDGAIDQAVGDGLELFVRVRSTRAPQPAWLRAVGGGYEVELVAGEEGVSPGQACVF
YDAADGQARVLGGGFIKSAAPRWSADGVRDDAASPALAAMRG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagcatgctcaacagcctggatctggaaggtcgcccgcaggacacccgcgtc
gtggttgcgatgtcgggcggggtcgattcatcggccacggctgcgctgctgaagtcgcag
ggttacgatgtcgtcggcatcacgctgcagctctacgaccacggcgccgccacccatcgc
aagggcgcctgctgcgccggccaggacatccacgacgcccgcgctgtcgccgagcgcatc
ggcattccgcattacgtgctcgactacgaaagccgctttcgcgagtcggtcatcgacagc
tttgcggacagctacgcgctgggcgaaacgccggtgccctgcatcgaatgcaaccgctcg
gtgaagtttcgcgacttgctggcgaccgcgcgggagctcggcgcctcggcgctcgccacc
ggacactatgtctcgtcccggcgcctcgacgacggatcgcgcgcattgatctgcgccgcc
gatcgcgatcgcgaccagagctacttcctgttcgcgaccacccgcgagcaactcgatttt
ctgcgctttccactcggcgacatgaccaagccgcagacccgtgaactggcgcggcagttc
ggcctgtcggtcgccgacaagcacgacagccaggacatctgcttcgtgccgaccggccgc
tacaccgatgtggtcgagcgactgaagccgaacgcgatggagcccggcgagatcgtcgat
ctcaacggccacgtgctcggcagccatcccggcatcgtgcatttcaccgtcggccagcgc
cgcggtctcggcatcgcctcgcgggcgccgctttatgtgctgcggctcgatgcggcgcac
cggcgcgtagtggttggcccgcgcgaggcgcttcggatggagcggatcgtactgcgcgac
gtcaactggatcggcgacggcgcgatcgatcaggcggtcggcgacgggctggaattattc
gtgcgggtgcgctcgacacgtgcgccgcagccggcctggctgcgcgccgtcggaggcggc
tacgaggtcgagctggtcgcgggcgaggagggcgtttcgcccggccaggcctgtgttttc
tacgacgcggcagacgggcaggcgcgcgtgctgggtggcggcttcatcaagagcgctgcg
ccgcggtggagcgccgatggagtacgcgacgacgcggcttcgcctgcgctggcggcgatg
cgcggataa
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