Rhodopseudomonas palustris BisB5: RPD_3984
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Entry
RPD_3984 CDS
T00345
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00010
Glycolysis / Gluconeogenesis
rpd00620
Pyruvate metabolism
rpd00630
Glyoxylate and dicarboxylate metabolism
rpd00640
Propanoate metabolism
rpd00680
Methane metabolism
rpd00720
Other carbon fixation pathways
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RPD_3984
00620 Pyruvate metabolism
RPD_3984
00630 Glyoxylate and dicarboxylate metabolism
RPD_3984
00640 Propanoate metabolism
RPD_3984
09102 Energy metabolism
00720 Other carbon fixation pathways
RPD_3984
00680 Methane metabolism
RPD_3984
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpd01004
]
RPD_3984
Enzymes [BR:
rpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
RPD_3984
Lipid biosynthesis proteins [BR:
rpd01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
RPD_3984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABE41203
UniProt:
Q131N6
LinkDB
All DBs
Position
complement(4430991..4432598)
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AA seq
535 aa
AA seq
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MLTETSDYDSLYRDFRWSVPARFNIATAACDRHAIGDKPALIYVDEAGAVTRMSFAEIAS
ASRRFANVLKAAGLARGDRVAVFLSQSIELPIAHLAAFRSGLVSVPLFTLFGEDALEFRL
SNSGARAVITDESGLPKLLRIRDRLPELRQIYVTGGAAPSGVELFWSKLDAASDAFETVD
TSCDDPAIIIYTSGTTGNPKGALHAHRVLLGHLPNVEMAHDFFPRPGDLMWTPADWAWIG
GLFDALFPAWYHGVAMLGHRARKFEPQAAMQLMADHGVRNVFLPPTALKLMRQADVKHPG
VKLRSIFTGGESLGGELLAWVRATFGVDAHEIYGQTECNLVVGNNARLFPIRPGSMGKAT
PGFDVRIVDEDGRELPCGERGIIGVRQPNPCTMLEYWKNPEATAKKFAGGFLLTGDLARQ
DGDGYFWYDSREDDVITSAGYRIGPSEIEHTLLKHPAVAFAAVVGVPDPIRTEAIKAWIV
LRPGFAKGDALAREIQNFVKVQLAAHEYPRHVEFTETLPMTATGKVLRRELRAKG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaaacctccgactacgatagcctctaccgcgatttccgttggtcggttccc
gcccgcttcaacatcgcgaccgcggcgtgcgatcggcacgcgatcggcgacaagccggcg
ctgatctatgtcgacgaagccggcgcggtcacgcggatgtcgttcgccgagatcgccagc
gcctcgcgccgcttcgccaatgtgctgaaggccgccggcctcgcgcgcggcgaccgcgtc
gcggtgttcctgtcgcaatcgatcgagctgccgatcgcgcatctcgcggcgttccgttcg
gggctcgtctcggtgccgttgttcacgctgttcggcgaggacgcgctggagtttcgtctg
tcgaattccggcgcccgcgcggtgatcaccgatgagagcgggctgccgaagctgctcagg
atccgcgaccgcctgccggagttgcggcagatctacgtcaccggaggcgcggcgccgtcc
ggcgtcgagctgttctggtccaagctcgatgcggcgtccgatgcgttcgagacggtcgac
acctcctgcgacgatcccgcgatcatcatctacacctcgggcacgaccggtaacccgaaa
ggcgcgctgcacgcccatcgcgtgctgctcggccatctgccgaatgtcgagatggcgcac
gacttctttccgaggcccggcgacctgatgtggacgccggcggattgggcgtggatcggc
ggattgttcgatgcgctgtttccggcctggtatcacggcgtcgcgatgctcggccaccgc
gccagaaagttcgagccgcaggccgcgatgcagctgatggccgatcacggcgtccgcaac
gtgttcctgccgccgaccgcgctgaagctgatgcggcaggcggatgtgaaacatcccggc
gtcaagttgcgcagcatcttcaccggcggcgagtcgctcggcggcgaattgctggcctgg
gtgcgcgccactttcggcgtcgatgcgcacgagatctacggccagaccgaatgcaatctg
gtggtcggcaacaacgcaaggctgtttccgatccgtcccggctcgatgggcaaggcgacg
ccgggtttcgatgtccgcatcgtcgatgaagacggccgggaactgccgtgcggcgagcgc
ggcatcatcggcgtgcgccagcccaatccctgcaccatgctggaatattggaagaacccg
gaggcgaccgcgaagaaattcgcaggcggcttcctgctcaccggagatctggccaggcag
gacggcgacggttacttctggtacgacagccgcgaggacgatgtcatcacctcggccggc
tatcgcatcggcccgtcggagatcgagcacacgctgctgaagcatccggcggtggcgttc
gccgcggtggtcggcgtgcccgatccgatccgcaccgaagcgatcaaggcctggatcgtt
ctgcgcccgggcttcgccaagggcgacgcgttggcgcgcgagatccagaatttcgtcaag
gtccagcttgccgcccacgaatatccccgccacgtcgaattcaccgagacgttgccgatg
accgcgaccggcaaggtgctgcgccgcgagctgcgggcgaaggggtag
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