Rhodopseudomonas palustris BisB5: RPD_4000
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Entry
RPD_4000 CDS
T00345
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rpd03012
]
RPD_4000
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
RPD_4000
Translation factors [BR:
rpd03012
]
Eukaryotic type
Release factors
RPD_4000
Prokaryotic type
RPD_4000
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GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
ABE41219
UniProt:
Q131M0
LinkDB
All DBs
Position
complement(4446424..4447047)
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AA seq
207 aa
AA seq
DB search
MRLFVGLGNPGSKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGSLDGERITLLK
PLTYMNESGRAVQEAVSFYKIGHGEVAVFHDEIELPPAKLRVKVGGGIAGHNGLRSISAH
IGNDYLRVRLGVGHPGVKELVHGHVLGDFAKSERPWVAALAEAVADNAGLIAKGREATFA
NKVHLALQARGFLDDDNKKSGADKAAK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgtttgttgggttgggcaatcccgggtcgaagtaccaggacaaccggcacaac
atcgggttcatggtcatcgacgagatcgcacggcgtcatggcttctcgccatggcgccgt
cgctttcagggcgagaccgccgacggctcgctggacggcgagcggatcacgctgttgaag
ccgctcacctacatgaacgagtccggtcgcgccgtgcaggaagccgtgagcttctacaag
atcgggcacggtgaggtcgcggtgtttcacgacgagatcgaactgccgccggcgaagctg
cgggtcaaggtcggcggcggcatcgccgggcacaacggcctgcgctcgatctcggcgcat
atcggcaacgactatctgcgggtgcggctcggcgtcggccatccgggcgtcaaggaactg
gtgcacggccatgtactcggcgacttcgccaaaagcgagcggccatgggtcgcggcgctg
gccgaagccgtcgcggacaatgccgggctgatcgcgaagggccgcgaggcgaccttcgcc
aacaaggtacatctggcgctacaggccaggggatttttggacgacgacaacaagaagtct
ggcgccgacaaggccgccaagtaa
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