Rhodopseudomonas palustris BisB5: RPD_4007
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Entry
RPD_4007 CDS
T00345
Name
(GenBank) acyl-CoA dehydrogenase-like
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00071
Fatty acid degradation
rpd00280
Valine, leucine and isoleucine degradation
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01212
Fatty acid metabolism
Module
rpd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
RPD_4007
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPD_4007
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
RPD_4007
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Motif
Pfam:
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
ABE41226
UniProt:
Q131L3
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Position
4452448..4453644
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AA seq
398 aa
AA seq
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MDMTFGDVELAFQQEVRDFIAANLTPDMKRAESLNASVFSEPETGVPWQRALNAKGWGAP
GWPVEYGGPGWTPAQRWIFETECAHAGVPSPTPMGVKMVGPVIIGFGSPEQKNYFLPRIL
SCEDYWCQGYSEPGSGSDLSSLKTRAVRDGDDYVINGTKIWTTHAHNANMMFALVRTSDE
PRQQDGISFVLIDMKSPGITIRPILTIGGDHEVNQVFFDDVRIPASNLVGEEGKGWTYGK
YLLEFERGSGIASAKLRKALHRTAALAESDATGRAIEDPDIAIRMSEAEVDIDALEMTEL
RVLSALQNGQNPGAVSSILKLRTSEIYQAVSRLGVDVIGNDGLYVEPTRPLHRLNAPPAI
PEDELAVMPTHLNGRAYTIFGGTSEIQRDIISKLVLGL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaccttcggcgacgtcgaactcgccttccagcaagaggtccgcgacttcatc
gcggccaatctcacgcccgatatgaagcgggcggagtcgctcaacgcctcggtgttctcc
gagccggagaccggcgtgccgtggcagcgcgccctcaacgccaagggctggggcgcaccg
ggctggccggtggaatatggcggccccggctggacgccggcgcagcgctggatcttcgag
accgaatgcgcccatgccggcgtgccgtcgccgacgccgatgggcgtcaagatggtcggc
cccgtcatcatcggcttcggctcgccggagcagaagaactacttcctgccgcggattctg
tcctgcgaggactattggtgccagggctattcggagcccggctcgggctcggacctgtcg
tcgctgaagacccgcgcggtccgcgacggcgacgactacgtcatcaacggcaccaagatc
tggactacccacgcgcacaacgccaacatgatgtttgcgctggtgcgcaccagcgatgag
ccgcgccagcaggacggcatcagcttcgtgctgatcgacatgaagagccccggcatcacc
atccgcccgattctcacgatcggcggcgaccacgaggtcaaccaggtgttcttcgacgac
gtccggattccggcgtcgaatctggtcggcgaggaaggcaagggctggacctacggcaag
tatctcctggaattcgagcgcggctccggcattgcctcggcgaagctccgcaaggcgctg
cacagaacggcggcgctcgccgagtcggacgcgaccggccgggcgatcgaggatccggac
attgcgatccggatgtcggaggccgaggtcgatatcgatgcgctggaaatgaccgagctg
cgggtgctctccgccctgcagaacggccagaaccccggcgcggtgtcgtcgatcctgaag
ctgcgcaccagcgagatctaccaggcggtgagccggctcggcgtcgacgtcatcggcaac
gatggcctctatgtcgaaccgacccgcccgctgcaccggctcaacgccccgccggcgatt
cccgaggacgaactcgccgtgatgccgacgcatctcaacggccgcgcctacaccatcttc
ggcggcacctcggaaatccagcgcgacatcatcagcaagctggtgctggggttgtag
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