Rhodopseudomonas palustris BisB5: RPD_4135
Help
Entry
RPD_4135 CDS
T00345
Name
(GenBank) protein of unknown function DUF224, cysteine-rich region
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00630
Glyoxylate and dicarboxylate metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPD_4135
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
RPD_4135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4_16
Fer4_6
Fer4
Fer4_9
Fer4_4
Fer4_2
Fer4_21
Fer4_3
LutB_C
Motif
Other DBs
NCBI-ProteinID:
ABE41354
UniProt:
Q130Y5
LinkDB
All DBs
Position
complement(4603347..4604660)
Genome browser
AA seq
437 aa
AA seq
DB search
MKTEFSLAQLADPDIAEADKILRACVHCGFCTATCPTYVLLGDELDSPRGRIYLIKEMLE
NNAPPTADVVKHIDRCLSCLACMTTCPSGVNYMHLVDQARARIERDYTRPLPDRLVRELL
SWLMPHPGMFRFSMWMARLLRPVAALLPGSHDLAHPTFLSRIKAMLALAPKHLPEPGPAS
GTMFPAVGPRRGRVALLHGCAQQVLAPRINRAAINLLTRHGIEVVLAADEACCGALIHHL
GRDTRTLEYARTNIKAWLREIDRGGLDAVLVTTSGCGTVIKDYGYMLREDPEFAASAAKV
SALAKDISEYIGTLELSPPQPHGDVVVAYHSACSLQHGQKVTQLPKELLSKSGFVVKDIP
ESHLCCGSAGTYNILQPDIATRLRDRKVANIASVKPDMIAAGNIGCMVQIASGTDVPVVH
TIELLDWATGGPRPAIS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgaattcagtctcgcccagctcgccgatccggatatcgccgaggccgacaag
atcctgcgcgcctgcgtgcattgcgggttctgcacggcgacgtgcccgacctatgtgctg
cttggcgatgaactcgacagcccgcgcggccgcatttacctgatcaaggagatgctggaa
aacaacgcgccgccgacggcggacgtggtcaagcatatcgatcgctgcctgtcgtgcctc
gcctgcatgaccacttgtccgtcgggcgtgaactacatgcatctggtcgatcaggcgcgc
gcccggatcgagcgggactatacgaggccgctgcccgatcgcctcgtgcgcgagctgttg
tcgtggctgatgccgcaccccggcatgttccgtttcagcatgtggatggcgcggctgttg
cggccggtggcggcgctgctgcccggatcgcacgatctcgcccatccgacgttcctcagc
cggatcaaggcgatgctggcgctcgccccgaagcatttgccggagcctggcccggcctct
ggaaccatgttcccggcggtcggacccaggcgcggacgcgtcgcactgctgcacggctgc
gcccaacaggttctggcgccgcgtatcaaccgcgccgccatcaatttgctgacacgccac
ggcatcgaggtcgtgctcgcggcggatgaagcctgctgcggcgccctgatccatcatctg
gggcgtgacacgcggaccctcgaatacgcccgtaccaacatcaaggcgtggctgcgcgag
atcgatcgcggcggcctcgacgcggttctggtgacgacctcaggctgcggcaccgtcatc
aaggactatggttacatgttgcgcgaggatccggaattcgcggcatcggcggcgaaggtc
tcggcgctcgcaaaggatatcagcgaatatatcggcacccttgagctgtcgccgccgcag
ccgcatggcgatgtcgtcgtcgcttatcactccgcatgttcgctgcagcacggtcagaaa
gtcacgcagctccccaaagaattgctttccaagtccggattcgtggtgaaagatatcccg
gagagtcatttgtgttgtggttcggcgggcacgtacaacattctccagcctgacatcgcg
accagattgcgcgaccgcaaagtcgccaacatcgcttccgtcaagccggacatgattgcc
gctggcaatatcggctgcatggtgcagatcgccagcggaacggacgtccctgtagtgcac
acgattgagcttctcgattgggcgacaggtggtccccggccggcgatcagctga
DBGET
integrated database retrieval system
