Rhodopseudomonas palustris BisB5: RPD_4177
Help
Entry
RPD_4177 CDS
T00345
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00350
Tyrosine metabolism
rpd00360
Phenylalanine metabolism
rpd00380
Tryptophan metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
RPD_4177
00360 Phenylalanine metabolism
RPD_4177
00380 Tryptophan metabolism
RPD_4177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpd04147
]
RPD_4177
Enzymes [BR:
rpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
RPD_4177
4.1.1.105 L-tryptophan decarboxylase
RPD_4177
Exosome [BR:
rpd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RPD_4177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ABE41394
UniProt:
Q130U5
LinkDB
All DBs
Position
4645926..4647380
Genome browser
AA seq
484 aa
AA seq
DB search
MERAGGHSGAASLDPDDWDALRADAHRMLDDMIDYIADVRERPVWQPIPDAVRARFSEQL
PRNETPLGEVYRSFSDNIAPYATGNVHPGFMGWVHGGGTAVGMLAEMLAAGLNANCGGRN
HIGIEVERQIVRWVRDLFGFPESASGLFVTGSSMANLMALLVARTAALGPQVREGGIKGE
PLTAYASAAAHGCVVQAADLAGLGRGALRRIAFDAAHRIDIAALRRRIAEDRAAGFQPFL
VTGSAGTVDVGAIDDLAALAAVCREEQLWFHVDGAYGSLGMLSDEIAPRLAGLSEADSVA
LDFHKWGQVNYDAGFLIVRDGEAHRQTFAAPAAYLRRETRGLAADSPWPCDFGPDLSRGF
RALKTWFTLKTFGAERLGAMIARTCAVARHLEARVRREPKLEMLAPVALNIVCFRYKAAS
GDADALNAEIVADIHESGIAAPSSTTIDGKLAIRAAITNHRTAFEDVDRMVDAVLRFGEA
REQR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgccggagggcattccggcgcggcgagcctcgatcccgacgactgggacgcg
ctgcgcgccgatgcgcatcgcatgctcgacgacatgatcgactacatcgcggacgtgcgc
gagcggccggtgtggcagccgatcccggacgccgtgcgcgcgcgcttcagcgagcagttg
ccgcgcaacgagacgccgctcggcgaggtctatcgctccttctccgacaacatcgcgccc
tatgccaccggcaatgtgcatcccggcttcatgggctgggtgcacggcggcggcaccgcc
gtggggatgttggccgagatgctggcggcggggctcaacgccaattgcggcggccgcaat
cacatcggtatcgaggtcgagcggcagatcgtgcgctgggtgcgcgacctgttcggcttc
ccggagagcgcgagcggattgttcgtcaccggctcctcgatggccaatctgatggcgttg
ctggtggcgcgcaccgcggcgctcgggccgcaggtccgggagggcggcatcaagggcgag
ccgctcaccgcctacgcgtcggcggcggcgcatggctgcgtggttcaggccgccgatctg
gccggcctcggccggggcgcgctgcggcggattgcgttcgacgccgcgcatcgcatcgat
atcgcagcgctgcgccgacggatcgcggaggatcgcgccgccggttttcagccgttcctg
gtgaccggctcggccggcaccgtcgatgtcggcgcgatcgacgatctcgccgcactcgcc
gcggtgtgccgcgaggagcaattgtggtttcacgtcgacggcgcctacggctcgctcggg
atgctgtcggacgagatcgccccacggctcgcaggactgagcgaagcggattcggtggcg
ctggatttccataaatggggccaggtgaattacgacgccggcttcctgatcgtgcgcgac
ggcgaggcgcatcgccagaccttcgccgcgccggccgcctatctgcgccgcgaaacccgc
ggccttgcggcggactcgccgtggccgtgcgatttcggccccgatctgtcgcgcggcttc
cgcgcgctgaagacctggttcacgctgaagaccttcggcgccgaacgattgggagcgatg
atcgcccgcacctgcgcggtggcgcgccatctcgaagcgcgggtgcggcgcgaaccgaag
ctggaaatgctggcgccggtggcgctcaacatcgtctgcttccgctacaaggcggcgtcc
ggcgacgccgatgcgctgaacgccgagatcgtcgccgacatccacgaatcggggattgcc
gcgccgtcctcgaccacgatcgacggcaagctcgcgatccgcgccgcgatcaccaaccac
cgcaccgcgttcgaggacgtcgaccggatggtggatgcggtgctgcggttcggggaagca
cgggaacagcgctga
DBGET
integrated database retrieval system
