Rhodopseudomonas palustris BisB5: RPD_4394
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Entry
RPD_4394 CDS
T00345
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd02010
ABC transporters
rpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPD_4394
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPD_4394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpd02000
]
RPD_4394
Transporters [BR:
rpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RPD_4394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ABE41610
UniProt:
Q12ZX9
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All DBs
Position
4860342..4861562
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AA seq
406 aa
AA seq
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MSIRITLLAAGAVALAAAQPAFAQKQYGPGVTDTEIKIGQTMPYSGPASAYGVQGHIEDA
YFAMVNAKGGVNGRKIKLISLDDAYSPPKTVEQTRRLVEQDEVLAIVGTIGTPTNSAIQK
YLNGKKVPHIFLSTGAAKWDDPKNFPWTTQLYPPYQMEGMIFAKYLLKNKPDAKLGVFSQ
NDDAGKDYVKGLKDGLGDKAKTMIVKEVTYEVTDPTVDSQIVALKASGADTLFTMATPKF
GAQAIRKVHELGWKPLNFVVSVSSSIKGALQPAGIEASTGLLTALAAKTPTDPRFENDAD
VKELKDFLAKWYPKGDIADGSTVTGYISAFMTVKVLEACGDNLTRENLLKQATNIPPTAA
PLLLPGIKISTRPDRYAPYTQMQIARFDGRSWVPEGEVFNTDTAAK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccgcatcacactgcttgccgcaggcgctgttgcgctcgccgcggcccaaccc
gccttcgcccagaagcaatacggccccggcgtcaccgacaccgagatcaagatcggtcag
acgatgccctatagcggcccggcttcggcgtatggcgtgcagggccacatcgaggacgcc
tacttcgcgatggtcaacgccaaaggcggcgtcaacggccgcaagatcaagctgatcagc
ctcgacgacgcctactcgccgcccaagacagtggagcagacgcgccgtctggtcgagcag
gacgaggtgctggcgatcgtcggcacgatcggcacgccgacgaattccgcgatccagaaa
tatctcaacggcaagaaagtgccgcacatcttcctctccaccggggctgcgaagtgggac
gatccgaagaacttcccatggaccacgcagctctatccgccctaccagatggagggcatg
atcttcgcgaagtatctgctgaagaacaagcccgacgccaagctcggcgtgttctcgcag
aacgatgacgccggcaaggactacgtcaagggcctgaaggacggcctcggcgacaaggcc
aagacgatgatcgtcaaggaggtcacctacgaggtcaccgatccgaccgtcgactcgcag
atcgtcgcgctgaaggcctcgggcgccgatacgctgttcacgatggcgactccgaaattc
ggcgcgcaggcgatccgcaaggtccatgaactcggctggaagccgctgaacttcgtcgtc
agcgtctccagctcgatcaagggcgcgttgcaacccgccggcatcgaggcttcgaccggc
ctgctgaccgcgctggcggcgaagacgccgaccgacccgcgcttcgagaacgacgccgac
gtcaaggagctgaaggatttcctggcaaagtggtatccgaaaggcgacatcgccgacggc
agcaccgtgaccggctacatctccgctttcatgacggtgaaggtgctggaagcctgcgga
gacaatctcacccgcgaaaacctgctgaagcaggcgaccaacatcccgccgaccgccgcg
ccgctgttgctgcccggcatcaagatctcgacacggccggatcgctacgcgccgtacacc
cagatgcagatcgcccgtttcgacggaagaagctgggtgccggaaggcgaggtgttcaac
accgacactgcggcgaagtag
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