KEGG   Rhodopseudomonas palustris BisA53: RPE_0005
Entry
RPE_0005          CDS       T00400                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rpe  Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rpe03032]
    RPE_0005
   03400 DNA repair and recombination proteins [BR:rpe03400]
    RPE_0005
Enzymes [BR:rpe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RPE_0005
DNA replication proteins [BR:rpe03032]
 Prokaryotic type
  DNA Topoisomerases
   RPE_0005
DNA repair and recombination proteins [BR:rpe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RPE_0005
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: ABJ03966
UniProt: Q07VR8
LinkDB
Position
6454..8895
AA seq 813 aa
MTEPARQPVAESEPAAPIEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATRVEVVLNADGSVTVRDDGRGIPVDIHKGEGISAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSKLQLRVWRNGKEHFIEFAHGDAVAPLVVVGDSNGKRG
TEVTFLASPETFTHIEYDFATLEHRLRELAFLNSGVNILLSDMRHAVEKREEMRYEGGVV
EFVKYLDRNKKAMVPAPIMIAAELNGIGVEAALWWNDSYHENVLCFTNNIPQRDGGTHLA
GFRGALTRQVNGYAEGIAKKEKIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEV
RPVVENVLNEALAAWFEEHPSEAKTIVGKVVEAAAAREAARKARELTRRKGALDIASLPG
KLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLGSE
QIGTLITALGTGIGRDDFDLAKLRYHKIILMTDADVDGAHIRTLLLTFFFRQMPSLIEGG
FLYIAQPPLYKVTRGKSEQYLKDERALEDYLIATGLDDCAFKLASGEERGGRDLLALVED
ARAIRGTLHNLHSRYNRSVVEQAAIAGVLNPRITGDLATANAAADYIARRLDALADEVER
GWVGRFAEGEGFFFERTVRGVKDVAMIDDALLGSADARKLDEYAARLQEAYPRPGTLRRK
DTETAIHGPVSLFEAVTDAGRKGVALQRYKGLGEMNPSQLWETTLDTNARSLLQVKVREV
DEADDIFTKLMGDVVEPRRDFIQENSLSANVDV
NT seq 2442 nt   +upstreamnt  +downstreamnt
atgactgaacccgcccggcaacccgttgccgaatccgagcccgcggcgccgatcgaatac
ggcgcggaatcgatccgggtgctgaagggcctcgacgccgtgcgcaagcggcccggcatg
tatatcggcgacaccgacgacggctccggcctgcaccacatggtctacgaggtggtcgac
aacgccatcgatgaggccttggccggccatgctacgcgggtcgaagtggtgctcaatgcc
gacggttcggtgacggtgcgcgacgacggccgcggcatcccggtcgacatccacaaggga
gaaggcatctcggcggccgaggtcatcatgacccagctgcacgccggcggaaaattcgac
cagaactcctacaaggtgtcgggcggcctgcacggcgtcggcgtctcggtggtcaacgcg
ctgtcgagcaagctgcaactgcgcgtctggcgcaacggcaaggagcacttcatcgaattc
gcccatggcgacgcagtggcgccgctggtggtggtgggcgattccaacggcaagcgcggc
accgaggtgaccttcctggcctcgccggaaaccttcacccatatcgagtatgatttcgcc
acgctggaacatcgcctgcgcgagctcgcgttcctgaactccggcgtcaacatcctgttg
tcggacatgcgccacgccgtcgagaagcgcgaggagatgcgctacgagggcggcgtggtg
gaattcgtgaaatatctcgaccgcaacaagaaggcgatggtgccggcgccgatcatgatc
gcggccgagctgaacggcatcggcgtcgaggccgcgctgtggtggaacgacagctatcat
gagaacgtgctgtgcttcaccaacaacattccgcagcgcgacggcggcacgcatctggcc
ggcttccgcggcgcgctgacgcggcaggtcaacggctatgccgaaggcatcgccaagaag
gaaaagatcgcgctgaccggcgacgattgccgcgagggcctgaccgcggtgctgtcggtc
aaggtgccggacccgaaattttcgtcgcagaccaaggacaagctggtctcctccgaagtt
cgcccggtggtcgagaacgtgctgaacgaagcgctcgccgcctggttcgaggaacacccc
tctgaagcgaagacgatcgtcggcaaggtggtcgaagccgcggcggcccgcgaagccgcg
cgaaaagcccgcgagctgacgcggcgcaaaggcgcgctcgacattgcatcattgcccggc
aaacttgccgactgccaggagcgcgacccggcaaaatccgaactgttcatcgtcgagggc
gactcggccggtggttcagcaaagcaaggccgcaaccgcgaattccaggcggtgctgccg
ctccgcggcaagatcttgaacgtcgagcgcgcgcgcttcgacaagatgctgggttcggag
cagattggcacgctgatcaccgcgctcggcaccggcatcggccgcgacgatttcgatctc
gcaaaactgcgctatcacaagatcatcctgatgaccgacgccgacgtcgacggcgcgcat
atccgcacgctgctgctgacgttcttcttccggcagatgccgtcgctgatcgagggcggc
ttcctctatatcgcgcagccgccgctctacaaggtgacgcgcggcaagtccgagcagtac
ctgaaagacgagcgcgcgctggaagactatctgatcgccaccgggctcgacgactgcgcg
ttcaagctcgcctccggcgaggaacgcggcggccgcgacctgttggcgctggtggaagac
gcccgcgcgatccgcggcacgctgcacaatctgcacagccgctacaatcgcagcgtggtt
gaacaggcggcgatcgccggcgtgctgaacccgcggatcaccggcgatctcgccaccgcc
aacgccgccgcggattacatcgccagacggctcgacgcgctagccgacgaggtcgagcgc
ggctgggtcggccgttttgccgagggcgaaggttttttcttcgagcgcaccgtgcgcggc
gtcaaggacgtcgccatgatcgacgacgcgctgctgggctccgcggacgcgcgcaagctc
gacgaatatgcggcaaggctgcaggaggcctatccgcgccccggcacgctgcgccgcaag
gataccgaaaccgcgatccacggcccggtgagcctgttcgaggccgtgaccgacgccggc
cgcaagggcgtggcgctgcagcgctacaaaggcctcggcgagatgaacccgagccagctc
tgggaaaccacgctcgacaccaacgcacgctcgctattgcaggtgaaggtgcgtgaagtc
gacgaggccgacgacatcttcaccaagctgatgggcgacgtcgtcgaaccgcgccgcgat
ttcatccaggaaaactcgctgagcgccaacgtcgacgtgtag

DBGET integrated database retrieval system