Entry |
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Name |
(GenBank) DNA gyrase subunit B
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KO |
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Organism |
rpe Rhodopseudomonas palustris BisA53
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Brite |
KEGG Orthology (KO) [BR:rpe00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:rpe03032]
RPE_0005
03400 DNA repair and recombination proteins [BR:rpe03400]
RPE_0005
Enzymes [BR:rpe01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RPE_0005
DNA replication proteins [BR:rpe03032]
Prokaryotic type
DNA Topoisomerases
RPE_0005
DNA repair and recombination proteins [BR:rpe03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPE_0005
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
6454..8895
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AA seq |
813 aa
MTEPARQPVAESEPAAPIEYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVD
NAIDEALAGHATRVEVVLNADGSVTVRDDGRGIPVDIHKGEGISAAEVIMTQLHAGGKFD
QNSYKVSGGLHGVGVSVVNALSSKLQLRVWRNGKEHFIEFAHGDAVAPLVVVGDSNGKRG
TEVTFLASPETFTHIEYDFATLEHRLRELAFLNSGVNILLSDMRHAVEKREEMRYEGGVV
EFVKYLDRNKKAMVPAPIMIAAELNGIGVEAALWWNDSYHENVLCFTNNIPQRDGGTHLA
GFRGALTRQVNGYAEGIAKKEKIALTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEV
RPVVENVLNEALAAWFEEHPSEAKTIVGKVVEAAAAREAARKARELTRRKGALDIASLPG
KLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRGKILNVERARFDKMLGSE
QIGTLITALGTGIGRDDFDLAKLRYHKIILMTDADVDGAHIRTLLLTFFFRQMPSLIEGG
FLYIAQPPLYKVTRGKSEQYLKDERALEDYLIATGLDDCAFKLASGEERGGRDLLALVED
ARAIRGTLHNLHSRYNRSVVEQAAIAGVLNPRITGDLATANAAADYIARRLDALADEVER
GWVGRFAEGEGFFFERTVRGVKDVAMIDDALLGSADARKLDEYAARLQEAYPRPGTLRRK
DTETAIHGPVSLFEAVTDAGRKGVALQRYKGLGEMNPSQLWETTLDTNARSLLQVKVREV
DEADDIFTKLMGDVVEPRRDFIQENSLSANVDV |
NT seq |
2442 nt +upstreamnt +downstreamnt
atgactgaacccgcccggcaacccgttgccgaatccgagcccgcggcgccgatcgaatac
ggcgcggaatcgatccgggtgctgaagggcctcgacgccgtgcgcaagcggcccggcatg
tatatcggcgacaccgacgacggctccggcctgcaccacatggtctacgaggtggtcgac
aacgccatcgatgaggccttggccggccatgctacgcgggtcgaagtggtgctcaatgcc
gacggttcggtgacggtgcgcgacgacggccgcggcatcccggtcgacatccacaaggga
gaaggcatctcggcggccgaggtcatcatgacccagctgcacgccggcggaaaattcgac
cagaactcctacaaggtgtcgggcggcctgcacggcgtcggcgtctcggtggtcaacgcg
ctgtcgagcaagctgcaactgcgcgtctggcgcaacggcaaggagcacttcatcgaattc
gcccatggcgacgcagtggcgccgctggtggtggtgggcgattccaacggcaagcgcggc
accgaggtgaccttcctggcctcgccggaaaccttcacccatatcgagtatgatttcgcc
acgctggaacatcgcctgcgcgagctcgcgttcctgaactccggcgtcaacatcctgttg
tcggacatgcgccacgccgtcgagaagcgcgaggagatgcgctacgagggcggcgtggtg
gaattcgtgaaatatctcgaccgcaacaagaaggcgatggtgccggcgccgatcatgatc
gcggccgagctgaacggcatcggcgtcgaggccgcgctgtggtggaacgacagctatcat
gagaacgtgctgtgcttcaccaacaacattccgcagcgcgacggcggcacgcatctggcc
ggcttccgcggcgcgctgacgcggcaggtcaacggctatgccgaaggcatcgccaagaag
gaaaagatcgcgctgaccggcgacgattgccgcgagggcctgaccgcggtgctgtcggtc
aaggtgccggacccgaaattttcgtcgcagaccaaggacaagctggtctcctccgaagtt
cgcccggtggtcgagaacgtgctgaacgaagcgctcgccgcctggttcgaggaacacccc
tctgaagcgaagacgatcgtcggcaaggtggtcgaagccgcggcggcccgcgaagccgcg
cgaaaagcccgcgagctgacgcggcgcaaaggcgcgctcgacattgcatcattgcccggc
aaacttgccgactgccaggagcgcgacccggcaaaatccgaactgttcatcgtcgagggc
gactcggccggtggttcagcaaagcaaggccgcaaccgcgaattccaggcggtgctgccg
ctccgcggcaagatcttgaacgtcgagcgcgcgcgcttcgacaagatgctgggttcggag
cagattggcacgctgatcaccgcgctcggcaccggcatcggccgcgacgatttcgatctc
gcaaaactgcgctatcacaagatcatcctgatgaccgacgccgacgtcgacggcgcgcat
atccgcacgctgctgctgacgttcttcttccggcagatgccgtcgctgatcgagggcggc
ttcctctatatcgcgcagccgccgctctacaaggtgacgcgcggcaagtccgagcagtac
ctgaaagacgagcgcgcgctggaagactatctgatcgccaccgggctcgacgactgcgcg
ttcaagctcgcctccggcgaggaacgcggcggccgcgacctgttggcgctggtggaagac
gcccgcgcgatccgcggcacgctgcacaatctgcacagccgctacaatcgcagcgtggtt
gaacaggcggcgatcgccggcgtgctgaacccgcggatcaccggcgatctcgccaccgcc
aacgccgccgcggattacatcgccagacggctcgacgcgctagccgacgaggtcgagcgc
ggctgggtcggccgttttgccgagggcgaaggttttttcttcgagcgcaccgtgcgcggc
gtcaaggacgtcgccatgatcgacgacgcgctgctgggctccgcggacgcgcgcaagctc
gacgaatatgcggcaaggctgcaggaggcctatccgcgccccggcacgctgcgccgcaag
gataccgaaaccgcgatccacggcccggtgagcctgttcgaggccgtgaccgacgccggc
cgcaagggcgtggcgctgcagcgctacaaaggcctcggcgagatgaacccgagccagctc
tgggaaaccacgctcgacaccaacgcacgctcgctattgcaggtgaaggtgcgtgaagtc
gacgaggccgacgacatcttcaccaagctgatgggcgacgtcgtcgaaccgcgccgcgat
ttcatccaggaaaactcgctgagcgccaacgtcgacgtgtag |