Rhodopseudomonas palustris BisA53: RPE_0302
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Entry
RPE_0302 CDS
T00400
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpe03016
]
RPE_0302
Enzymes [BR:
rpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RPE_0302
Transfer RNA biogenesis [BR:
rpe03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RPE_0302
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABJ04261
UniProt:
Q07UX3
LinkDB
All DBs
Position
complement(342496..343032)
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AA seq
178 aa
AA seq
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MPRLFAGLEIPEEVGHTLSMLRGGLPGARWVDPEDYHVTLRFIGDIDAVSANEIASMLFR
VNRKPFEVTVQGLQSFGGKKPRAVVATVLPSRPLIELQAELERLMQRLGFDPEGRKFTPH
ITLARLRDATNQDVADYLSMRGYFPTKQFTAQRFVLFSARASTGGGPYVVEDSYALSA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcgctggactggaaattccggaagaggtcggccacacgctctcgatg
cttcgcggtggcctccccggcgcccgctgggtcgatccggaagactatcacgtcaccttg
cgcttcatcggggacatcgacgccgtttcggccaacgagatcgcgtcgatgctgtttcgg
gtcaaccgcaagccgttcgaagtgacggtgcaggggttgcagagttttggcggcaagaaa
ccccgcgcggtggtcgccacggtgctgccgagccggccgctgatcgaattgcaggccgag
ctggagcggctgatgcaaaggctcgggttcgatcccgagggccgcaaattcaccccgcac
atcacgctggcgcggctgcgcgacgccaccaaccaggacgtcgccgattatctgtcgatg
cgcggctattttccgaccaagcagttcaccgcgcaacgcttcgtgctgttctcggcgcgc
gcctccaccggcggcgggccctatgtggtcgaggattcctacgcgctgtcggcgtga
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