Rhodopseudomonas palustris BisA53: RPE_0460
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Entry
RPE_0460 CDS
T00400
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_0460
Enzymes [BR:
rpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPE_0460
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RPE_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
DEAD
AAA_16
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ABJ04419
UniProt:
Q07UG5
LinkDB
All DBs
Position
complement(502366..505863)
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AA seq
1165 aa
AA seq
DB search
MSVPRMIPSDAIAKQVQASDPTASVFVSANAGAGKTHVLVQRVIRLLLAGVPPEKILCIT
FTKAAAANMAQRVFSTLGHWVTLSDGALDAAIRGAGIAKPDAKLRTRARELFACALETPG
GLKVQTIHALCTRLLQQFPFEANVPARFTVLDERDQAEMMERASLGVLLRAASAPDSEIG
RALTTAMTSAADTTFRDVVREACMSRDSFLAWVDRAGSTERAMAELSAALGVAPKDDAAS
IDSDIVDGPHLPRAQWEAAAEVFEAGGANDAKQAQRLREALDLSGHAQIERYLSVFCTGD
GGARKSLATKKIAEADPALCAVLAREAERIGALLQRRRAVAARDRTQALLLIATSVADAI
RREKQERGLLDYDDLIDKTLAMLDRISAGWVHYKLDRGVDHVLIDEAQDTSPKQWDIVER
LIAEFTAGEGARENIKRTIFAVGDEKQSIFSFQGAVPREFAERRETLRSRFQKADLSFEK
VSFNYSFRSGAAILQSVDHVFRDEDIYRSIHADTTYPVHQSLTDAGPSLIDLWELQQPDE
RQDLEGWQAPFDAVSATSPEVKLAQRVQAEIAALISGGTLTGPVGSRRRLRYGDVLILVR
RRGSAFDAVIQALKRGNIPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVALKSP
LFGLDDDDLFKLAWERQGSLRQALADQAATNDKFGIAQQRLNDCAKLALSQSPFSFYAWL
LGGDRGRARMLRRLGHEATDALDEFLELALAYERKAPATLQGFVAWLRAADTEIKRDMEI
ARDEVRVMTVHGAKGLEAPVVFLIDTTSSPADTQRLNLIRLPQGNAGPGTPSVMVWAGKK
ADDPPAVANARAAMIGDTEDEYRRLLYVAMTRAADRLIVGGCQPGNRNEVREASWYDLIC
KGLERSGLPMQEIAGPDGAVKRFCRAEDAWPETAIAATAALPEPIAELPFWLSLPAPPLT
PTERTLQPSSAEIDAARTARRGEPTDARERARQRGVLVHRLLQSLPEIAPTRRRDAAAGF
LGRNTDPKIWPEADRTALADRVLALIADPRFASVFAEGSRAEVPIIGRLRQPGGVPFLVS
GQIDRLVVSDEAVLIVDFKTNQTPPGNESEVPVTYLRQLALYRAVLARLHPSKPVRAALL
WTEAPEMMEISSVALDRELVAIMSA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgccccgcatgattccgtcggacgccatcgccaagcaggtccaggcctccgac
cccacagcttcggtgttcgtctctgccaatgccggggccggcaagacccatgtgctggta
cagcgggtgataaggctgctgctcgccggcgtgccgccggaaaagatcctctgcatcacc
ttcaccaaggccgccgccgccaacatggcgcagcgggtgttctcgacgctcggccattgg
gtgacgcttagcgacggcgcgctcgacgccgcgatccgcggcgccggcatcgctaagcca
gatgcgaaactgcgcacccgcgcccgcgaactcttcgcctgcgcgctcgaaactccgggc
gggctgaaggtgcagaccatccacgcgctgtgcacgcggcttttgcagcagtttccgttc
gaggccaatgtgccggcgcggttcaccgtgctcgacgagcgcgaccaggccgagatgatg
gaacgcgccagcctcggcgtgctgctgcgcgccgcgtcagcgccggacagcgagatcggc
cgggcgctgacgacggcgatgacttcggcggcggacacgaccttccgcgacgtggtgcgc
gaagcctgcatgagccgcgacagttttctggcctgggtcgaccgcgccggttcaaccgag
cgggcgatggcggagttgtcggccgcgctcggcgtggcgccgaaggacgacgctgcgagc
atcgatagcgacatcgtcgacggcccgcatctgccgcgcgcgcaatgggaggcggcagcg
gaggtttttgaagccggcggcgccaatgatgccaagcaggcgcagcggttgcgcgaagcg
ctcgacctttccggccatgcccagatcgagcgctatctcagcgtgttttgcaccggcgac
ggcggcgcgcgcaaatcgctcgcgaccaagaagatcgccgaggccgatcccgcgctctgc
gccgtgctggcacgcgaggccgagcggatcggcgcgctgctgcagcgccgccgtgcggtc
gccgcgcgcgaccgcacccaggcgctgctgctgatcgcaacctcagtcgccgacgccatc
cgtcgcgagaagcaggaacgcgggctcttggattatgacgacctgatcgacaagacgctg
gcgatgctcgaccgcatctccgccggctgggtgcactacaagctcgaccgcggcgtcgat
cacgtgctgatcgacgaagcgcaggacaccagccccaagcaatgggacatcgtcgagcgg
ctgatcgccgaattcaccgccggcgaaggcgcgcgcgaaaacatcaagcgcaccatcttc
gcggtcggcgacgagaagcagtcgatcttctcgttccagggcgcggtgccgcgcgaattc
gccgagcggcgtgagacactgcgcagccgattccagaaggctgatctcagcttcgagaag
gtcagcttcaactactcgttccgctccggtgcggcgatcctgcaatcggtcgaccatgtg
tttcgcgacgaagacatctatcgctcgatccacgccgacaccacctacccggtgcaccag
tcgctcaccgatgcggggccgagcctgatcgatctgtgggaattgcagcagcccgacgaa
cggcaggatctcgaaggctggcaggcgccgttcgacgcggtgtcggccaccagcccggaa
gtgaagctggcgcagcgcgtgcaggcggagatcgccgcactgatcagcggcggcaccttg
accgggccggtcggcagccgccgccgcctacgctacggcgacgtgctgatcctggtgcgc
cggcgcggaagcgcgttcgacgcggtgatccaggcgctgaagcgcggcaacattccggtg
gccggcgccgaccggctgaaactgaccgagcacatcgccatcatcgacctgatgaatttg
gccgatgcgctgctgctgccgcaggacgacctcgcgctggcggtggcgctgaaaagcccg
ttgttcgggctcgacgacgacgatctgttcaagctcgcctgggagcgacaaggttcgctg
cggcaggcgctggcggatcaggcggcaaccaacgacaaattcggcatcgcccagcagagg
ctgaacgactgcgcgaaactcgctttgtcgcaatccccgttcagcttctacgcctggctg
ctcggcggcgaccgtggccgcgcccgcatgctgcgacggctcggccatgaagccaccgac
gcgctcgacgaatttctcgaactggcgctcgcctatgagcgcaaggcgccggcgacgctg
caggggtttgtcgcctggctgcgcgccgccgataccgagatcaagcgcgacatggagatc
gcccgcgacgaggtgcgagtgatgaccgtgcatggcgccaaggggctggaagcgccggtg
gtgtttctgatcgacaccacctcctcgccggccgacacccagcggctcaatctgatccgg
ctgccgcaaggcaacgccggcccgggcacgcccagcgtgatggtgtgggccggcaagaag
gccgacgatccgccggcggtcgccaatgcccgcgccgcgatgatcggcgacaccgaggac
gaatatcgccggctgttgtatgtggcgatgacgcgcgccgccgaccggctgatcgtcggc
ggctgccagcccggcaaccgcaacgaggtgcgcgaagcctcctggtacgatctgatctgc
aaggggctagagcgttccgggctgccgatgcaggagatcgccgggcctgacggcgcggtg
aagcggttttgccgcgccgaggacgcatggccggagaccgccatcgccgcgaccgcggca
ttgcctgagccgatcgccgagctgccgttctggctcagcctgcccgcgccgcccctcacg
ccgaccgagcggacgttgcagccctcgagcgccgagatcgacgccgcgcgcaccgcccgg
cgcggcgaaccgaccgacgcccgcgagcgggcgcggcaacgcggcgtgctggtgcaccgg
ctgctgcagtcgctgcccgaaatcgcgccgacgcgccggcgcgatgcggcggccggcttc
ctcggccgcaacaccgatccaaaaatctggcccgaggccgatcgcaccgcgttggccgac
cgcgtgctggcgctgatcgccgatccccgcttcgcatccgtgttcgccgagggcagccgg
gcggaagtgccgatcatcggacggctgcggcagccgggcggcgtgccttttctggtctcc
ggccagatcgaccggctggtggtgagcgacgaggcggtgttgatcgtcgatttcaagacc
aaccagaccccgcctggtaacgaatccgaggtgcccgtcacctatctgcggcagctcgcg
ctgtaccgcgcggtgctcgcgcggctgcacccgtcaaagcccgtccgcgccgccctgctc
tggaccgaagcgcctgaaatgatggagatttccagcgttgcgctggaccgggagctggta
gccatcatgtcggcgtga
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