Rhodopseudomonas palustris BisA53: RPE_0461
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Entry
RPE_0461 CDS
T00400
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_0461
Enzymes [BR:
rpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPE_0461
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RPE_0461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABJ04420
UniProt:
Q07UG4
LinkDB
All DBs
Position
complement(505860..509009)
Genome browser
AA seq
1049 aa
AA seq
DB search
MRVFTIPPSAPFLRRLITALVDGELVPGFEARTQPERLATATLYLPTRRAGRMAREIFLD
VLQRDAAILPRIVALGDIDEDELAFAQEADPLGGAAALDVPPALGELERRLTLAQLVAVW
AKQLKPGDPAAAPLVVGGPASTIALATDLARLIDDMATRGVDWKQLDGLVPDALDRYWQL
SLDFLKIARQWWPAFLQERGRIEPALRRDQLIDAEAKRLAAHPTGPVIAAGSTGSMPATA
RFLAAIARLPQGAVVLPGLDSDLDDAAWALIGGHQDSQGQTLAPPSSNHPQFALHALLRD
HLKIERRDVVPLGEPSPTGRELLASEALRPSTATARWHQRLQEPAVEARIAAGMQTLSVI
AADNSEMEALSIAVALREADALGRTAALVTPDRALARRVMAALGRWNLPFDDSGGDALVD
TPVGIFARLAAEAATTGLEPATLLALLKHPLLRLGAAQGTWQRAIETLELAVLRGTRPPA
MSSGLAQEFSRFRVELAKLRRGEPSLLHRAEPRAQLRDAALDQAELLITRLAAALAPLET
LQAAQQFDLAEFARRHCEVLIALSSDADGLVAALDGPQGSVLAGAFDEMPASSGVTALPR
DYPEAFAALFADRIVRRPEAVGARLRIYGPLEARLTHCDRLILGGLVEGIWPPAPRIDPW
LSRPMRHQLGLDLPERRIGLSAHDFAQLLGHDEVILTYAAKVGGSPAVASRFLHRLEAVA
GETRWKDAVARGQTYLDYAHALDRPDKIEPIAQPAPRPPRAARPRKLSVTAIEDWLRDPY
TIYAKHILKLIPLDPVDMPLSAADRGSAIHAAIGEFTETYATSLPQDSAALLRAIGRRHF
APLMQRPEAAALWWPRFLRIADWFANWETERRLNVSSVITEQSGSLTIALDHDREFVLSA
RADRIERRTDRTFALLDYKTGNPPSAKQVRMGLSPQLTLEAAILRAGGFADIPAGASVSE
LVYVKLSGNNPPGNECVLELKRDRSEPVQSPDDAASEARAKLEELIRKFEDEATPYTSLD
LAMWSNRYGSYDDLARIKEWSAAGGGAER
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcaccattccgccctcggcgccgtttctgcgcaggctgatcaccgcgctg
gtcgatggcgagctggtgcccggcttcgaggcccgcacgcagccggagcggctggcgacc
gcgacgctgtatctgccgaccaggcgcgccgggcggatggcgcgcgaaatttttctcgac
gtcctgcagcgcgacgccgcgatcctgccccgcatcgtcgcgctgggcgacatcgacgag
gacgagctggcctttgcccaggaggccgatccgctcggtggcgcggccgcgctggatgtg
ccgccggcgctgggtgagctggaacgccggctgacgctggcgcaactggtcgcggtgtgg
gccaagcagctaaaacccggcgatcccgccgcggcgccgctggtggtcggcggcccggcc
tcgaccatcgcgctcgccaccgacctggcgcggctgatcgacgacatggcgacgcgtggc
gtcgactggaagcaactcgacggcctggtgcccgacgcgctcgaccgctactggcagctg
tcgctggattttctgaaaatcgcgcggcagtggtggccggccttcctgcaggaacgcggc
cggatcgagccggcgttgcgccgcgaccaattgatcgacgccgaagccaagcggctcgcc
gcgcatcccaccgggccggtgatcgcggccgggtccaccggctcgatgccggcgaccgcg
cgcttcctcgccgccatcgcccgactgccgcagggcgcggtggtgctgccggggctcgac
agcgatctcgacgacgcggcgtgggcgctgatcggcggccatcaggattcgcagggccag
acgctggctccgccgtcgtcgaaccatccgcaattcgcgctgcatgcgctgctgcgggat
catctcaagatcgaacgccgcgatgtcgtgccgctcggcgagccttcgcccaccggccgc
gaattgctcgcctccgaggcgctgcggccctcgaccgccaccgcgcgctggcatcagcgg
ctccaggagccggccgtcgaagcccgcatcgccgccggcatgcagacgctgtcggtgatt
gccgccgacaattccgagatggaagcgctttcgatcgcggtggcgctgcgagaggccgat
gcgctgggccgcaccgccgcgctggtgacgcccgaccgcgctttggcgcggcgggtgatg
gcggcgctgggacgctggaatttgccgttcgacgattccggcggcgacgcgctggtcgac
accccggtcggcatctttgcacgattagcggcggaagcggcgaccacagggctggagccg
gcgacgctgctggcgctgctgaaacatccgctgctcaggctcggcgccgcgcaaggcacc
tggcaacgcgcgatcgagacgctggagctcgccgtgctgcgcggcacacggccgcctgca
atgagctcagggctggcgcaggaattctcccggtttcgcgttgagcttgcgaaactgaga
cgcggcgagccctcgctattgcatcgcgccgagccgcgggcacaactccgcgacgccgcg
ctcgatcaggccgaactcctgatcacgcgccttgcggcggcactggcgccgctggagacg
cttcaagccgcgcaacagttcgacctcgccgaattcgcccggcgtcattgcgaggtgctg
atcgcgctgtcgagcgacgccgatggcctggtagcagcgctcgacggcccacaaggcagc
gtgctcgcgggcgctttcgacgagatgccggcgtcaagcggcgtcaccgcgctgccgcgc
gactaccccgaagccttcgcggcgctgttcgccgaccgcatcgtccgccgccccgaagcg
gtgggcgcacgactacgcatctacggcccgctggaagcgcggctgacgcattgcgaccgg
ctgatcctcggcggcctggtcgaaggcatctggccgccggcgccgcggatcgacccgtgg
ctgagccggccgatgcggcatcagctcggcctcgatctgccggaacgccgcatcggcctc
tcggcgcacgactttgcgcaactgctcggccatgacgaagtgattctcacttacgccgcc
aaggtcggcggctctccagccgtggcctcgcgattcctgcatcggcttgaagccgtcgcc
ggcgagacgcgatggaaggacgccgttgcgcgcggccaaacctatctcgactacgctcat
gcgctcgaccgccccgacaagatcgagcccatcgcgcagccggcgccgcgaccgccgcgc
gcggcgcggccgcggaagctgtcggtcaccgcgatcgaggactggctacgcgatccctac
accatctacgccaagcacatcctgaagctgataccgctcgacccggtcgacatgccgctg
tcggcggccgatcgcggctcggcgatccacgccgcgatcggcgaattcaccgaaacctat
gccacaagtttgccgcaagattccgcggccctgttgcgcgccatcgggcggcgccatttc
gcgcccctgatgcagcggcccgaggcggccgcgctgtggtggccgcgattcttgcggatc
gccgactggtttgcgaactgggagaccgagcgacggctcaacgtcagctccgtgatcacc
gagcaatccggcagcctgaccattgcgctcgatcatgatcgcgaattcgtgctgtcggcg
cgcgccgatcgcatcgagcgccgcaccgatcgcaccttcgcgttgctggactacaagacg
ggcaacccgcccagcgccaagcaggtgcggatggggctgtcgccgcaactcacactcgaa
gccgcgatcctgcgcgccggcggctttgcagacatccctgccggcgcctcggtcagcgaa
ctggtttacgtcaaactcagcggcaacaatccgcccggcaacgaatgcgtgctggaattg
aagcgcgaccgtagcgaaccggtgcaatcgcccgacgacgccgcgagcgaggcgcgcgcc
aagctcgaagagttgatccgcaaattcgaggatgaagccacgccctatacatcgctcgat
ctggcgatgtggtcgaaccgctacggcagctatgacgacctcgcccggatcaaggaatgg
tcggccgcaggtggtggagccgagcgatga
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