Rhodopseudomonas palustris BisA53: RPE_1062
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Entry
RPE_1062 CDS
T00400
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpe03009
]
RPE_1062
Enzymes [BR:
rpe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RPE_1062
Ribosome biogenesis [BR:
rpe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RPE_1062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ABJ05016
LinkDB
All DBs
Position
complement(1200874..1202109)
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AA seq
411 aa
AA seq
DB search
MTETLVIDHVGHRGDGVALRDGASIYVPFALGGETVAVEPVAGHPDRRALLSVEQPSAER
ITPFCKHFGVCGGCAIQHWRADRYQAWKRELVVEALSQAGIDCEVAPLIDAHGQGRRRIT
LHARKGTHEVLKVGFAAAGSHDIVPIDRCPILDPALDGALDAAWALAEPLTTEAKPLDIQ
VTAADEGLDVDIRGSGPVSSRMLTTLSKLAEQHRLARLTRHGELVLMRTPPTIQVGAARL
TLPPGAFLQATRAGEETLADLVSERCGKAKNVVDLFCGVGPFALRLATKARVAAYDSEAS
AIAALQKAAGTPGLKPMTIEIRDLFRRPLVPQQLEDVDAVVFDPPRQGAQAQCQQLAKSR
VPLIVAVSCNAATFARDARLLLDGGYRIDQLTPVDQFRHTPHVELVARFRK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccctagtgatcgaccacgtcggccatcgcggcgacggcgttgcgttgcgc
gatggcgcgtcgatctacgtgccgttcgcgcttggcggcgagaccgtcgcggtcgaaccg
gtcgcgggccatcccgaccgccgcgcgctgctgtcggtcgagcagccgagcgcggagcgg
atcacgccgttctgcaagcattttggcgtctgcggcggctgcgcgatccagcattggcgc
gcggatcgctatcaggcctggaagcgcgagttggtggtcgaagcgctgtcgcaggccggg
atcgactgcgaggtggcgccgctgatcgacgcgcatggccaaggtcgccgccgcatcacg
ctgcacgcccgcaagggcacccacgaggtgctgaaagtgggcttcgccgccgccggctcc
cacgacatcgtgccgatcgaccgctgcccgatcctcgatcccgcgctcgacggcgcgctc
gatgccgcctgggcgctggccgagccgctgaccaccgaggccaagccgctcgatatccag
gtcaccgccgccgacgaaggcctcgatgtcgatatccgcggctccggcccggtgtcgtcg
cggatgctcacgacgctgtcgaaactcgccgagcagcacagactggcgcggctgacccgg
cacggcgaattggtgctgatgcgcacgccgccgaccattcaggtcggcgccgcgcggctg
acgctgccgcccggcgcgtttctgcaggccacccgcgccggcgaggaaacgctggccgac
ctggtcagcgagcgctgcggcaaggccaagaatgtggtcgatctgttctgcggcgtcggc
ccgttcgcgctgcggctggccaccaaagcccgcgtcgccgcctatgacagcgaggcgagc
gcgatcgccgcgttgcaaaaggccgccggcacgccggggctgaagccgatgaccatcgaa
atccgcgacctgttccggcggccgctggtgccgcagcaactcgaggacgtcgacgccgtg
gtgttcgatccgccgcggcagggcgcgcaggcgcaatgtcagcaattggcgaagagccgc
gtgcccttgatcgtcgcggtgtcgtgcaacgccgccaccttcgcccgcgacgcccgcctg
ctgctcgacggcggctaccgcatcgatcagctcacgccggtcgaccagttccgccacacc
ccgcatgtcgaactggtggcgcggtttcggaagtag
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