Rhodopseudomonas palustris BisA53: RPE_1783
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Entry
RPE_1783 CDS
T00400
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00061
Fatty acid biosynthesis
rpe00071
Fatty acid degradation
rpe01100
Metabolic pathways
rpe01212
Fatty acid metabolism
rpe02024
Quorum sensing
rpe04146
Peroxisome
Module
rpe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPE_1783
00071 Fatty acid degradation
RPE_1783
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPE_1783
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPE_1783
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpe01004
]
RPE_1783
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpe04147
]
RPE_1783
Enzymes [BR:
rpe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPE_1783
Lipid biosynthesis proteins [BR:
rpe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPE_1783
Exosome [BR:
rpe04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPE_1783
Exosomal proteins of breast cancer cells
RPE_1783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABJ05731
UniProt:
Q07QQ3
LinkDB
All DBs
Position
1982559..1984103
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AA seq
514 aa
AA seq
DB search
MSQDSLFHGLISGDRRRSHGEVAARAHKIAGGLRALGVKQGDCVCVLMRNDIAFLETAYA
VMTLGAYAVPVNWHFKPDEVAYVVGDSGSRILVGHADLLHQQAGQLPATIAVLSLPPPPE
IIAAYKVDPVLRAPPPGAIDFEPWLAQQPAYDGPALPQPQNMIYTSGTTGHPKGVKRFAP
TPEQAASAEQMRALIYGLKPGARALLPGPLYHSAPNAFGLRAGKLGGALVLMPRFEPERF
LQIIAAERIDTLFMVPTMFIRLMKLPAEVRAKYDVSSLRHVIHAAAPCPAEVKRAMIEWW
GPVIYEFYGSTESGAVTFATSQDALDKPGTVGKIAPGAELKFVDDNDRELPEGGIGEIFS
RIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYVDADGYVFICDRKRDMVISGGVNIYPA
EIEAALHAIAGVHDCAVFGIPDAEFGEALMAKLEPQPGVTLEVEAIRRELKKMLADYKVP
KHIEIMAQLPREDSGKLFKRKMRDPYWQNAGRTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagactcccttttccacggcctgatctccggcgaccgccgccgcagtcatggc
gaggttgcggcgcgggcgcacaagatcgccggcgggctgcgcgcgctcggcgttaagcag
ggcgattgcgtctgcgtgctgatgcgcaacgacatcgcctttctcgagacggcctatgcc
gtgatgacgctcggcgcctatgcggtgccggtgaactggcatttcaagccggacgaggtc
gcctatgtggtcggcgattccggctcgcgcatcttggtcggtcatgccgacctgctgcac
cagcaggcgggccagctgcccgcgaccatcgctgttctcagcctgccgccgccgccggaa
atcatcgcggcctacaaggtcgatcccgttttgcgggcgccgccgcccggcgcgatcgat
ttcgaaccgtggctggcgcagcagccggcctatgacggcccggcgctgccgcagccgcag
aacatgatctacacctccggcaccaccggccatccgaaaggcgtcaagcgtttcgcgccg
acgccggagcaggccgccagcgccgagcagatgcgggcgctgatctatgggctgaaaccc
ggcgcccgcgcgctgctgccggggccgctgtatcactccgcgccgaacgccttcggtctg
cgcgccggaaaactcggcggcgcgctggtgctgatgccgcggttcgagccggagcgattt
ctgcagatcatcgccgcggagcggatcgacaccctgttcatggtgccgaccatgttcatc
cggctgatgaagctccccgcggaggtccgcgccaaatacgacgtctcgtcgctgcgccat
gtcatccacgccgccgcgccgtgcccggccgaggtcaagcgcgcgatgatcgaatggtgg
ggaccggtgatctacgaattctacggctcgaccgagagcggcgcggtgacattcgccact
tcgcaggacgcgctcgacaagcccggcacggtgggcaaaatcgcgcccggcgccgagctc
aaattcgtcgacgacaatgatcgcgaactgccggagggcgggatcggcgagatcttttcg
cggatcgccggcaatccggatttcacctatcacaacaagccggagaagcgcgccgagatc
gaccgcggcggcttcatcacctccggcgacgtcggctatgtcgacgcagatggctacgtc
ttcatctgcgaccgcaagcgcgacatggtgatctccggcggcgtcaacatctaccccgcc
gagatcgaggcggcgctgcacgccattgccggcgtgcatgattgcgcggtgttcgggatc
cccgatgcggaattcggcgaggcgttgatggccaagctcgaaccgcagccgggcgtcacg
ctcgaggtcgaggcaatccgtcgcgagctgaagaagatgctggccgactacaaggtgccg
aagcacatcgagatcatggcgcaattgccgcgcgaggattccggcaaactgttcaagcgc
aagatgcgcgatccgtactggcaaaacgcgggacggacgatctag
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