Rhodopseudomonas palustris BisA53: RPE_1860
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Entry
RPE_1860 CDS
T00400
Name
(GenBank) protein of unknown function DUF853, NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_1860
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RPE_1860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
AAA_10
AAA_30
FtsK_SpoIIIE
T2SSE
Hydrolase
Zot
ResIII
Spidroin_N
AAA_25
TrwB_AAD_bind
AAA_19
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABJ05808
UniProt:
Q07QH6
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Position
2071229..2072851
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AA seq
540 aa
AA seq
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MATTEDGIGDTLDKIFIGKEQETAWLTLALANRHGLVTGATGTGKTVSLQVMAEGFARAG
VPVFAADIKGDLSGIAQAGAPNEALLKRAKQMALELQPDQFTTVFWDVFGEQGHPIRATV
SEMGPLLLSRMLDLNDVQEGVLNVAFRVADDNNLSLLDMKDLRAMLDAIAPIAQKVAEQG
DLNADIRQAAQALGNVTKQTVGTIQRQLLVLENQGGDKFFGEPALQLKDFMRTDRDGRGV
VNILAADKLMNNPRLYATFLLWMLSELFEELPELGDPDKPKLVFFFDEAHLLFNDAPKSL
MDKIEQVVRLIRSKGVGVYFITQNPIDVPDRVLAQLGNRVQHALRAFTPRDQKAVAAAAD
TFRPNPKLDTAKVITELGKGEALVSFLEGNGTPAMVERVMIRPPTARIGPVTPDERKAII
AASPVKGKYDTAIDAESAYEMLRNRIEGNTAGGGDDNAKPAEGGGILDQLGSMVGTIFGT
NTPRGRLSTGQVVARNVARTVTNTVIGGIAANLGKSVGGALGGSVGRSIVRGTLGGLLRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccgaggatggtatcggcgatacattagacaagatctttattggcaaggaa
caagagacggcgtggctgacgctggcgctggccaatcgccatggcctggtcaccggcgcc
accggcaccggcaagacggtttcgttgcaagtgatggcggaaggtttcgcgcgcgccggc
gtgccggtgttcgccgccgacatcaagggcgatctctccggcatcgcgcaagccggcgcg
ccgaacgaggcgttgctgaaacgcgccaagcagatggcactcgaactgcagcctgaccaa
ttcacgacggtgttttgggacgtattcggcgaacagggccatccgatacgcgccaccgtt
tccgaaatggggccgctgttgctgtcccgcatgctcgatctcaacgacgtgcaggaaggc
gtgctcaatgtcgcgtttcgagtagcggacgacaacaatctgtcgctgctggacatgaag
gacttgcgcgcgatgctggacgcgatcgcgccgatcgcgcagaaggtcgcggaacagggc
gacctcaatgccgacatcaggcaggcggcgcaggcgctcggcaatgtcaccaagcagacg
gtcggcaccatccagcggcagttgctggtgctggagaaccagggtggcgacaaattcttc
ggcgaaccggcgctgcagctgaaagacttcatgcgcaccgaccgcgatgggcgcggggtg
gtgaatatcctcgccgccgacaagctgatgaacaatccgcggctttacgccacgttcctg
ctctggatgctgtcggaattgttcgaggaactgcccgaactcggcgatccggacaagcca
aaactggtgttcttcttcgacgaggcgcatctgttgttcaacgacgcgccgaaatcgctg
atggacaagatcgagcaggtggtgcggctgatccgctccaagggcgtcggtgtgtatttc
attacccagaatccgatcgacgtgccggaccgggtcttggcgcaactcggcaaccgggtt
cagcacgcgctacgcgccttcacgccgcgcgaccagaaggcggtggcggctgcggccgat
accttccggcccaatccaaagctcgataccgccaaggtcatcaccgagctcggcaagggt
gaggcgctggtgtcgttcctcgaaggcaacggcacgccggcgatggtcgagcgggtgatg
atccggccgccgaccgcgcggatcgggccggtgacgccggacgaacgcaaggcgatcatc
gccgcgagcccggtcaagggcaaatacgacaccgcgatcgacgccgaatccgcctacgaa
atgctacgcaatcggatcgagggcaacaccgccggcggcggtgacgataacgccaaaccg
gccgaaggcggcggcatcctcgatcagctcggctcgatggtcggcaccatcttcggcacc
aacacaccgcgcggcaggctctcgaccgggcaggtggtagcacgcaacgtggcgcgcacc
gtgaccaataccgtgatcggcggcatcgcggctaatctcggtaaatcggtcggcggcgcg
cttggtggctcggtggggcgctcgatcgtgcgtggaacgctcggcggtctgctgcgtcgt
tga
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