Rhodopseudomonas palustris BisA53: RPE_2137
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Entry
RPE_2137 CDS
T00400
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03420
Nucleotide excision repair
rpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPE_2137
03430 Mismatch repair
RPE_2137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_2137
Enzymes [BR:
rpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPE_2137
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPE_2137
MMR (mismatch excision repair)
Other MMR factors
RPE_2137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ABJ06081
UniProt:
Q07PQ3
LinkDB
All DBs
Position
complement(2355702..2358242)
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AA seq
846 aa
AA seq
DB search
MTDPTKLSADFGDNDVPGYRPAAGGIAARARAATMPAYLSGLNPEQSEAVETLEGPVLVL
AGAGTGKTRVLTSRIAHILSSGRARPGEILSVTFTNKAAREMKLRLGQMLGQAVEGMPWL
GTFHSIGGRILRYHAELVQLKSNFTVLDTDDQIRLLKQLLAADNIDDKRWPARMLAGLID
GWKNRGLTPSQVPAGEAAVFGNGRGGKLYTLYQERLKILNAADFGDLLLENIRLFREHPD
VLRQYQTRFKYILVDEYQDTNVAQYLWLRLLAQAPSQSSLPGSTRQSIASSQDGSPGLDA
SRRPGDDDRMSGNAAPAPPPKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLE
RNYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDGEKVTVTGAWDSEEEARGVGEEIEQL
QRQGHKLNDIAILVRASFQMREFEDRFVTLGLPYRVIGGPRFYERAEVRDALAYLRVINS
SADDLAFERIVNVPKRGLGDATVQLLHDHGRKRKIPLFEAARAITETDELKPKARGSLRD
LITSFERWRAQRDVVSHTDLAQIVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFE
NLQGFLEHISLVMDREGGADEDAVSLMTLHSAKGLEFDSVFLPGWEEGLFPHQRALDDQG
RAGLEEERRLAHVGITRARKRAKLYFATNRRIHGTWNTTIPSRFLDELPADHVEITESKG
GSGWGGAGGYGASRFDDIGAFGSSYSTPGWQRAQANRSRGGGGFADSGGNYSRADSGFAK
KRAPLTIDGELVAKSTGAHSDFELGNRVFHQKFGYGEVTKVDGNKLTIAFDKAGEKKVVD
SFVERV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgaccaagctcagcgccgactttggcgacaacgatgtgcccggctatcgc
cccgccgccggcggcattgccgcgcgcgcccgcgccgccacgatgccggcctatctttca
ggcctcaatccggagcagagcgaagccgtcgagacgctggaagggcccgtgctggtgctg
gccggcgccggcaccggaaagacccgcgtgctgacctcgcggatcgcgcatatcctctcc
agtggccgcgcccgccccggcgaaatcctctcggtgaccttcaccaacaaggccgcgcgg
gaaatgaagctgcggctcggccagatgctgggccaggcggtcgagggcatgccgtggctc
ggcaccttccattcgatcggcggccgcatcctgcgctatcacgccgaactggtgcagctg
aaatccaacttcaccgtgctcgacaccgacgaccagatccggctgctgaagcaactcttg
gccgccgacaacatcgacgacaagcgctggccggcgcggatgctggcgggcctgatcgac
ggctggaagaaccgcggactgacgccgtcgcaggtgccggccggcgaagccgcggtgttc
ggcaatggccgcggcggaaaactctacacgctgtatcaggagcggctgaaaattctcaat
gccgcggatttcggcgatctcttgttggaaaacatccggctgttccgcgaacaccccgac
gtgctgcggcagtatcagacccgcttcaagtacattttggtcgacgaatatcaggacacc
aacgtcgcgcagtatttgtggctgcgattgctggcgcaggcgccgtcacagtcgtcattg
ccgggctcgacccggcaatccatcgcttcttcgcaagatggatcaccgggtctcgacgct
tcgcgtcggcccggtgatgacgacagaatgagcggcaacgccgcccctgccccgcctccc
aaaaacatctgctgcgtcggcgacgacgatcagtcgatctatggctggcgcggcgccgag
gtcgacaacatcctgcgcttcgagcacgatttccccggcgccaaagtcattcgcttggag
cgcaattatcgctccaccgggcatattctcgccgccgcctcgcatctgatcgcgcacaac
gaaggccggctcggcaagacgctgcgcaccgaggacgtcgacggcgagaaagtcaccgtc
accggcgcctgggattccgaggaggaagcccgcggcgtcggcgaggagatcgaacagctg
cagcgccagggccacaagctcaacgacatcgccatcctggtccgcgcctcgttccagatg
cgcgagttcgaagatcgcttcgtcacgctcggcctgccctatcgcgtgatcggcggcccg
cgattctatgagcgcgccgaagtccgcgacgcgctggcttatctgcgcgtgatcaactcg
tccgccgacgacctcgccttcgagcgcatcgtcaacgtgcccaaacgtggcctcggcgac
gccaccgtgcagctgctgcacgaccacggccgcaagcgcaaaatcccgctgttcgaagcg
gcgcgcgccatcaccgagaccgacgagctgaaaccgaaggcgcgcggcagcctgcgcgat
ctgattacgtcgttcgagcgctggcgggcgcagcgcgatgtggtgtcgcacaccgacctc
gcccagatcgtgctggacgaaagcggctacaccgagatgtggcagaaggaccgctccgcc
gacgccgccggccggctcgagaacctcaaagagctggtgcgctcgatggaggagttcgaa
aacctgcaaggctttctcgaacacatctcgctggtgatggaccgcgagggcggtgccgac
gaggacgcggtcagcctgatgacgctgcattccgcaaaaggcctcgaattcgacagcgtg
tttttgccgggctgggaagaagggctgtttccgcatcagcgcgcgctcgacgatcagggc
cgcgccgggctcgaggaagaacgccgcctcgcccatgtcggcattacgcgcgcgagaaag
cgcgcgaagctgtacttcgccaccaaccggcggattcacggcacctggaacaccacgatc
ccgtcgcgcttcctcgacgaactgccggccgatcatgtcgagatcaccgaatccaagggc
ggctccggctggggcggcgccggcggctacggcgcctcgcgcttcgacgacatcggcgcg
ttcggctccagctactcgacgccgggctggcaacgcgcccaggccaaccgcagccgcggc
ggcggcggctttgccgacagcggcggcaactattcacgcgccgacagcggctttgccaag
aaacgcgcgcctctgaccatcgacggcgagctggtggcgaaatccaccggcgcccattcc
gatttcgaactcggcaaccgggtgtttcaccagaaattcggctatggcgaagtgacaaaa
gtcgacggcaacaaactcaccatcgccttcgacaaggccggcgagaagaaggtggtcgat
agtttcgtggagcgggtgtag
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