Rhodopseudomonas palustris BisA53: RPE_3022
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Entry
RPE_3022 CDS
T00400
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RPE_3022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpe03019
]
RPE_3022
03009 Ribosome biogenesis [BR:
rpe03009
]
RPE_3022
03036 Chromosome and associated proteins [BR:
rpe03036
]
RPE_3022
Enzymes [BR:
rpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RPE_3022
Messenger RNA biogenesis [BR:
rpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RPE_3022
Ribosome biogenesis [BR:
rpe03009
]
Eukaryotic type
90S particles
RNase
RPE_3022
Prokaryotic type
rRNA processing factors
RPE_3022
Chromosome and associated proteins [BR:
rpe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RPE_3022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ABJ06959
UniProt:
Q07M75
LinkDB
All DBs
Position
complement(3388043..3388849)
Genome browser
AA seq
268 aa
AA seq
DB search
MTQGETHIDPAAPPDDKATPPDAGREPAAARKRRARAEIKAAAAAIETRIGHDFKDAGLL
ATAFTHVSALKSSHSRADSYQRMEFLGDHVLGLVVSDMLYRAFPKADEGELSKRLADLVR
KETCADVALALGLLDGIKLGTVGAGAGARLRKSVLGDICEAVIGAVYLDGGYPAAAKFVE
ANWTERMRKPTRSLRDPKTVLQEWAQGKGLPTPAYREVERTGPDHDPKFRVRVELPGLEP
AEGIGGSKRAAEKEAASAMLAREGVSVG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgaaacccacatcgatcccgcggcgccccccgacgataaggcgacaccg
cccgacgccgggcgtgagccggcggctgcgcgcaagcggcgcgcccgggccgagatcaag
gccgcggccgctgcgatcgaaacgcggatcggccacgacttcaaggacgcagggctgctg
gcgaccgccttcacccacgtctccgcgctgaaatcgtcgcatagccgcgccgacagctat
cagcgcatggaattcttgggcgatcacgtgctggggctggtggtctccgacatgctgtac
cgcgcatttcccaaggcggacgaaggcgaactctccaagcggctcgccgacctggtgcgc
aaggaaacctgcgccgatgtcgcgctggcgctcgggctgctggacggcatcaagctcggc
accgtcggcgccggcgccggcgcccgcttgcgcaaatcggtgctcggcgacatctgcgaa
gcggtgatcggcgcggtctatctcgacggcggctatccggccgcggcaaaattcgtcgaa
gcgaactggaccgagcggatgcgcaagccgacgcgctcgctgcgcgatcccaaaaccgtg
ttgcaggaatgggcgcagggcaagggtctgccgacgccggcctatcgcgaggtggagcgc
accgggccggatcacgatccgaaattccgggtccgcgtcgaattgcccgggctagagccc
gcggaaggcatcggcggcagcaagcgcgccgcggaaaaggaagccgcatcggcgatgctg
gcaagggaaggggtcagcgttggctga
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