Rhodopseudomonas palustris BisA53: RPE_3040
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Entry
RPE_3040 CDS
T00400
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpe03009
]
RPE_3040
Enzymes [BR:
rpe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RPE_3040
Ribosome biogenesis [BR:
rpe03009
]
Prokaryotic type
ribosomal protein modification factors
RPE_3040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ABJ06977
UniProt:
Q07M57
LinkDB
All DBs
Position
3404141..3405466
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AA seq
441 aa
AA seq
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MEQAPAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLGAIGEAMAENGKVIVTGCMGAEPEQIEAAYPNVLSITGPQQYESVLEAVHRALPPIH
NPHLDLMPPQGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAAEVLREAEQLV
KAGVKELLVVSQDTSAYGVDLKYAESQWQDRAVRARFYDLAKELGSLGAWVRLQYVYPYP
HVDEVIELMAKGAVLPYLDIPFQHAASSVLTRMKRPAAQDKTLARIKRWRETCPDLALRS
TFIVGFPGETEQEFAELLDWLEEAEIDRLGAFKYEPVQGAASNALPDQIPAEVKQQRWDA
LMARQQKISARRLKRKVGTRQQVIIDEAGPNGAKGRSKADAPQIDGHVYLSSRRPLRVGE
LVTAKIDRADAYDLHGTVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcccgcgcccaaaatcagcttcgtctcgctcggctgccccaaggcgctg
gtggattccgaacgcatcatcacgcgccttcgggcggaaggctatgagctggcgcgcaaa
cacgacggcgccgacatcgtcatcgtcaacacctgcggctttctcgacagtgccaagcag
gaatcgctcggcgcgatcggcgaggcgatggcggagaacggcaaggtgatcgtcaccggc
tgcatgggcgcggagcccgagcagatcgaggccgcctaccccaatgtgctgtcgatcacc
ggcccgcagcaatatgagagcgtgctcgaagccgtgcaccgcgcgctgccgccaatccac
aatccgcatctcgatctcatgccgccacagggcatcaagctgacgccgcggcactacgct
tacttgaagatttccgagggctgcaacaaccgctgcagcttttgcatcatcccaaaactg
cgcggcgatctggtgtcgcgcccggccgccgaggtgctgcgcgaggccgagcagctggtc
aaggccggcgtcaaggaactacttgtcgtctcgcaggacacctcggcctatggcgtcgac
ctgaaatacgccgagagccagtggcaggaccgcgcggtgcgcgcgcgcttctatgatctc
gccaaggagctcggcagcctcggcgcctgggtgcggctgcaatatgtctatccctatccg
catgtcgacgaggtgatcgagctgatggcgaaaggagcggtgctgccctatctcgacatc
ccgttccagcacgccgcgagctcggtgctgacgcgaatgaagcgcccggcggcgcaggac
aagacgctggcgcggatcaagcgctggcgcgagacctgccccgatctggcgctgcgctcg
accttcatcgtcggttttcccggcgagaccgagcaggaatttgccgaactgctcgattgg
ctcgaggaagccgagatcgaccgcctcggcgccttcaaatacgagccggtgcaaggcgcc
gcctcgaacgccctgcccgatcaaatccccgcggaagtgaaacagcaacgctgggacgcg
ctaatggcccgccagcaaaagatttccgcccgccgcctgaagcgcaaggtcggcacacgg
caacaagtgatcatcgacgaagccggccccaatggcgcaaaaggccgctccaaagccgac
gccccgcagatcgacggccacgtctacttgtccagccgccgcccgttgcgcgtcggcgaa
ctcgtcaccgccaagatcgaccgcgccgacgcctatgatctgcacggcaccgtggcgggt
ttctaa
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