Rhodopseudomonas palustris BisA53: RPE_3442
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Entry
RPE_3442 CDS
T00400
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_3442
Enzymes [BR:
rpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RPE_3442
DNA repair and recombination proteins [BR:
rpe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RPE_3442
Prokaryotic type
RPE_3442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
ABJ07374
UniProt:
Q07L10
LinkDB
All DBs
Position
3836219..3837670
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AA seq
483 aa
AA seq
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MAISPPRPSLVWFRDDLRLSDHPALNAAASSGRPVLCLYVLDEQSPGGRPLGGAARWWLA
QSLRSLQQILSERGATLMLRRGAAAQVVAGLARETNAEVVYYNDIAMAPARTVAAELAAT
LADHGIAVHQHPGDLLAAPETIRTKEGRGLRVFTPFWKRVLSLGDPAKPLPAPTALGPPP
AAASDRLDDWALEPTAPDWAGGLRAAWQPGEAAAQRALTDFLTTGIAGYAGDRDRPDRPG
TSLLSPHLRFGEIGPRQIWHAARFAAAARPAIAGDVDKFLSELGWREFCRHLLFDHSDLA
TRNLQPAFDAFPWVEDPAGLRAWQRGLTGYPIVDAGMRQLWQTGVMHNRVRMVVASFLVK
HLLIDWRCGEQWFWDTLVDADAGSNPGNWQWVAGCGADAAPYFRVFNPILQGEKFDPDGA
YVRRFVPELARLPAALIHQPWTATPLELASAGVQLGHNYPEPIIEHRRGRERALAAYATV
RKT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccatctccccgcctcgcccgtcgctggtctggtttcgcgatgacctgcggctctcc
gaccacccggcgctgaacgcggcagcgagcagcggccgacctgtgctctgcctctacgtg
ctcgacgagcaaagcccagggggccggccgttgggcggcgcggcgcgctggtggctggcg
caatcgctgcgcagcctgcagcagatcctcagcgaacgcggcgccacgcttatgctgcga
cgcggcgcggccgctcaggtcgtcgcggggctggcgcgcgagaccaacgccgaggtggta
tattacaatgacatcgccatggccccggcgcgcaccgtcgccgctgaactggcagcgacg
ctcgccgaccatggcatcgccgtccaccaacaccctggcgatctgctggcggcgcccgag
accatccgcaccaaggagggtcgcggcctcagagtgttcacaccattctggaagcgcgtg
ctgtcgctcggcgatccggcaaagccgctccccgccccgaccgcgctcggccccccgccc
gcggcggccagcgatcggctcgacgattgggcactggaaccgaccgcgccggactgggcg
ggcggtctgcgcgcagcctggcaaccgggcgaagcagcggcgcagcgggcgttgacggac
ttcctcaccaccgggatcgcgggctacgccggcgatcgcgaccgccccgaccgacccggc
acttcgttgctgtcgccgcatttgcggttcggcgaaatcggcccgcgccagatttggcac
gcggcgcggtttgccgccgccgcacggcccgcgatcgccggggacgtcgacaagtttctc
agcgaactcggctggcgcgaattctgccggcaccttttgttcgatcattccgacctcgcc
acccgcaatctgcagccggcgttcgacgccttcccgtgggtcgaagatccggccgggctg
cgcgcctggcagcgcgggctcaccggctatccgatcgtcgacgccggaatgcggcaactg
tggcagaccggggtgatgcacaaccgggtgcggatggtagtggcctcgttcctggtcaag
catttgctgatcgactggcgctgcggcgagcaatggttctgggacacgctggtcgatgcc
gacgccggcagtaacccgggcaattggcaatgggtcgccggctgcggcgccgacgccgcg
ccctatttccgggtgttcaatccgatcctgcagggcgaaaaattcgatcccgacggcgct
tacgttcgccgcttcgtgcccgaactggcgcggctgccggcggccttgatccatcagcca
tggaccgcgacgccgttggaactcgcttccgccggcgttcagttggggcacaactatccc
gaaccgatcatcgagcatcgacgcggccgcgaacgcgcgctcgcggcctacgcaactgtg
cgcaaaacttga
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