Rhodopseudomonas palustris BisA53: RPE_3562
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Entry
RPE_3562 CDS
T00400
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPE_3562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpe03021
]
RPE_3562
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_3562
Enzymes [BR:
rpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPE_3562
Transcription machinery [BR:
rpe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPE_3562
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPE_3562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ABJ07492
UniProt:
Q07KP2
LinkDB
All DBs
Position
complement(3984118..3985137)
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVTPGSDSGRFATLVAEPLERGFGQTLGNALRRVLLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGTVTAGDIQ
TVGDIVVLNPDLQICTLDDGAEIRMEFTVNTGKGYVAAERNRPEDAPIGLIPVDSLFSPV
RKVSYKVENTREGQILDYDKLTMTIETNGAITPDDAVAYAARILQDQLNVFVNFEEPRKE
VTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagaattgattcgaccgaacaagcttcaggtcaccccg
ggtagcgattccggccgtttcgcgacgctggtcgccgagcccctcgagcgcggtttcggc
cagacgctcggcaacgcgctgcggcgcgtgctgctgtcgtcgctgcagggcgcggcggtg
cagtcggttcacatcgacggcgtgctgcacgagttctcctcgatcgccggcgtgcgcgag
gacgtcaccgacatcgtgctgaacatcaaggacatctcgatcaagatgcagggcgaaggc
ccgaagcgcatggtcgtgaagaagcaaggccccggcaccgtcaccgccggcgacatccag
accgtcggcgacatcgtcgtgctcaatccggacctgcagatctgcacgctggacgacggc
gccgagatccgcatggaattcaccgtcaacaccggcaagggctacgtcgccgccgagcgc
aaccgtcccgaggacgcgccgatcgggctgatcccggtcgacagcctgttctcgccggtc
cgcaaggtgtcgtacaaggtcgagaatacccgcgagggccagatcctcgactacgacaag
ctgaccatgacgatcgagaccaacggcgcgatcacgccggatgacgcggtggcctatgcc
gcgcgcatcctgcaggatcagctcaacgtgttcgtcaacttcgaagagccgcgcaaggaa
gtcacccaggagatcatcccggatctggccttcaacccggccttcctcaagaaggtcgac
gagctggagttgtcggtgcgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctggtgcagaagtcggaagcggaaatgctgcggaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagtgctggcccagatgggtctgcatctcggcatggaagtg
ccgggctggccgccggagaatatcgacgagctcgccaagcgcttcgaagaccactactga
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