KEGG   Rhodopseudomonas palustris BisA53: RPE_3725
Entry
RPE_3725          CDS       T00400                                 
Name
(GenBank) Ku domain protein
  KO
K10979  DNA end-binding protein Ku
Organism
rpe  Rhodopseudomonas palustris BisA53
Pathway
rpe03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    RPE_3725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpe03400]
    RPE_3725
DNA repair and recombination proteins [BR:rpe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     RPE_3725
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ABJ07654
UniProt: Q07K80
LinkDB
Position
4166262..4167137
AA seq 291 aa
MPSPRAYWKGTLKLSLVSCPVELYPATTSVEKTRFHLINAETGNRLKQQMVDEETGEVVD
KAQKSRGYELSKGKYVEIEKDELDAVQIESTRTIEIDSFVPRDEIDRRFLNHPYYIAPDG
KAGLDAFAVIRDAMADQDRVALARIVLTNREHVIAIEPFGKGLLGTTLRYPYELRDADDY
FAGIKSPKISKDMIELAVHILDSKAAHFDPSKFKDEYETALKTLVKRKAAGKPLPKPAAE
EKPDNVVSLMDALKQSLKGKQAAKAAARRPAKRSSTARKTTRGPARRRKAG
NT seq 876 nt   +upstreamnt  +downstreamnt
atgccctcgccccgcgcctattggaagggcacgctaaaactctcgctggtgtcctgcccg
gtggagctgtacccggcgaccaccagcgtcgagaagacgcgctttcatctgatcaatgcc
gagactggcaaccggctgaaacagcagatggtcgacgaggagaccggcgaggtcgtcgac
aaggcgcagaagagccgcggctacgagctcagcaagggcaaatatgtcgagatcgagaag
gacgaactggacgcggtgcagatcgaaagcacccgcaccatcgagatcgacagttttgtg
ccgcgcgacgagatcgaccgccgctttctcaaccatccttattacatcgcccccgacggc
aaggccgggctcgacgcctttgcggtgatccgcgacgccatggccgaccaggatcgcgtc
gcgctggcgcgcatcgtgctgaccaaccgcgaacacgtcatcgccatcgaacctttcggc
aagggcctgctcggcaccacgctgcgctacccgtacgaattgcgcgacgccgacgattac
ttcgccggcatcaagagcccgaaaatttccaaggacatgatcgagctcgcggtccacatt
ctcgacagcaaggccgcgcatttcgatccgtccaaattcaaggacgagtacgagaccgcg
ctgaaaacgctggtgaagcgcaaggccgccggcaaaccgctgccgaagccggcagccgag
gaaaagcccgacaacgtcgtcagcctgatggacgcgctgaagcagagcttgaaaggcaaa
caagccgccaaggccgcggcacgtcggccggccaagcgaagtagcaccgcgcgcaagacg
acacgcggcccggcgcggcggcgcaaggccgggtga

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