Rhodopseudomonas palustris BisA53: RPE_4042
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Entry
RPE_4042 CDS
T00400
Name
(GenBank) probably methylase/helicase
KO
K26273
protein strawberry notch
Organism
rpe
Rhodopseudomonas palustris BisA53
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpe03036
]
RPE_4042
Chromosome and associated proteins [BR:
rpe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RPE_4042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
HisG
Motif
Other DBs
NCBI-ProteinID:
ABJ07968
UniProt:
Q07JB6
LinkDB
All DBs
Position
complement(4522294..4526673)
Genome browser
AA seq
1459 aa
AA seq
DB search
MTPSSSSTVLTATVRSSTSLDSGDAAVRIIAAARFILPQLERAHRIDAAGLRVAMETAYS
GSDADGAWDWRSAYDACEAATVLFLRKYGPAMRARAASPDAMLPMLAKIAGLLPTHTRRS
EESEALQQFSTPIALGLAASTAAAITPSDIVLEPSAGTGLLAILAELSGASLVLNELAET
RAGLLTLLFPDLAVTRFDAAQIDDHLHAGITPSVVLMNPPFSAVANVDRRMGDAAFRHIA
SALARLADGGRLIAITGANCGPDNPTWRDAFVGLQQRAQVVFSAAIDGAVYARHGTTMDT
RLTVIDKRAAEAPSAFPVSAGVAPDVATLLGWILQSVPPRPPVALTPTISSIVRSVPSID
RARKPVVVRPSSFTANPHEPEAIELAYQTIDWKPVEGGNITDALYEAYSLQSIRFPGAKA
HPTRLVQSAAMASVAPPKPSYRPHLPADVIERGVLSDAQLETVVYAGEANSQFLAGSWSV
DETFDIVAAARDDAETAVRFRLGFMLGDGTGAGKGRQVAGILLDNWLKGRRKAVWISKSD
KLIEDAQRDWSALGQERLLVTPLSRFRQGTPIRLAQGILFTTYATLRSDARDDKISRVKQ
IVEWLGADAGSEAGAGFDGVIIFDESHAMQNAAGGKGERGDQAASQQGRAGLRLQHALPN
ARIVYVSATGATTVHNLAYAQRLGLWGGDDFPFATRAEFVEAIEAGGVAAMEVLARDLKA
LGLYAARSLSYEGVEYQLVEHRLTEEQIRIYDAYAGAFGIIHNNLDSALRAANVTGTTGT
LNAQAKSAARSAFESAKQRFFNHLITAMKVPSLIASVERDLNDGHAAVIQIVSTGEALME
RRLAEIPTEEWGDVQVDITPREYVLDYLAHSFPTQLYQPFTDSEGNLSSRPVFRDGQPVQ
CRDAVGRRDRLIEHLASLPAVHGALDQIVQRFGTDMVAEVTGRSRRIVRKTGSDGVDRLV
VENRAGSANLGEAQAFMDDVKRILVFSEAGGTGRSYHAELSAKNRRLRVHYLLEVGWKAD
AAIQGLGRTNRTNQTQPPLFRPIATNVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLF
RAEDNLESHYARDALRQLYLLLGNGKIADCSLQAFEDATGLKLTDSNGIRDHLPPITTFL
NRLLALTIALQNILFAAFEQLLTARVEGAIASGSYDVGLETLTAESFAVTGQQTIYTHPG
TSAETSLLTITQQERNRPVTLDEALQRLSDPRARLLVNRQSGRAAVQVPTRSVMLDDGEV
ERRVRLIRPMEHPTLPLALMPQTHWQEADRDTFARAWEAEVAEVPEFTSSEIHIVAGLLL
PIWKRLPNESTRVYRLQTDTGQRIIGRKVSPAWAAAATDVGLSTITPDAAFAALLDGKTI
IDLAESLQLRRVRVMGANRIELNGFSEAMRDRLRAYGLFSEIISWKLRFFVPVDATGPAV
LAKVLEHYPVLRVADRTAA
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatcttcctcctccacggtcctgaccgcgacagtacgatcttccacgtcgctg
gacagcggcgatgccgccgtccgaatcattgccgctgcacgcttcatccttccgcagctc
gagcgtgcccaccgcattgacgccgcgggcctgcgcgtcgcgatggagacggcctattcc
ggttcggacgccgatggtgcctgggactggaggtctgcctacgacgcttgcgaagcagcg
accgtcttgttcctgcgcaaatacggccccgcaatgcgcgcgcgcgccgcatcacccgac
gccatgctgccgatgctggcgaaaattgcgggccttcttcccacccacacgcgacggtcc
gaagagagcgaggcgcttcagcaattcagcacgccgatcgctctcggacttgcggcttca
accgcggcggcaatcaccccttccgacatcgtcctggagccatcggccgggactgggctg
ctcgccattcttgccgaattgtccggcgcttccctcgttttgaacgagttggccgagacg
cgtgccgggttgctcacgctgcttttcccagacctcgccgtgacccgcttcgacgccgcg
cagatcgacgatcatctccatgccgggatcacgccgagcgttgtgttgatgaacccgcca
ttttccgccgtcgccaacgtcgatcgccggatgggtgacgcagcgttccgccatatcgcg
tcggcactggcgcgattggctgatggtggccgcctgatcgctatcaccggcgccaattgc
gggcccgacaacccgacatggcgtgacgcctttgtcggcctgcagcagcgcgcgcaggtg
gtgttttcagccgcgatcgacggcgcggtctatgcccggcatggcaccaccatggacacc
cggctgaccgtgatcgacaaacgggcggctgaggctcccagcgcatttccggtgtcagcg
ggtgtagcgccagatgtcgccacgctgctcggctggatcttgcaatccgtgccgccacgg
ccgcccgttgcgctgacgccgacaatttcctcgatcgtccgatcggtgccgagtattgat
cgcgcgcggaagccggtcgtcgtcaggccttcctccttcacggccaatcctcacgagccg
gaggcgatcgagcttgcctaccaaaccatcgactggaagccggtcgagggcggcaacatc
accgatgcgctgtatgaagcctacagcttgcagtcgatccggtttcccggcgcgaaggcg
catccgacccggctggtgcaatcagcagcgatggcctcggtagcgccgccgaagccgagc
tatcgtccgcatcttcctgctgatgtcatcgaacgcggcgtcttgtcggatgcccagctg
gagacggtggtctatgccggcgaagccaattcacagttcctcgcaggatcctggagcgtt
gacgagactttcgacattgtcgcggccgcgcgcgacgacgccgagaccgcggtgcggttt
cgtctgggcttcatgcttggcgacggcaccggcgccggcaagggccggcaggtcgcgggt
atcctgctcgacaattggctgaaagggcgccgcaaggcggtctggatcagcaagtccgac
aagctgatcgaggatgcccagcgtgattggtcggcgctcggacaggaacggctgctggtg
acaccgctgtcgcgctttcgccagggcaccccgatccgtctcgcgcaaggcatccttttt
acgacctacgccacgctgcgctccgacgctcgtgacgacaagatatcgcgggtgaaacag
atcgtggaatggttgggcgccgacgcaggctctgaggccggggcgggtttcgacggcgtg
atcatttttgacgagtctcacgcgatgcagaatgctgcgggcggcaaaggcgaacgcggc
gatcaggccgcctcgcagcagggccgtgccggtctccgtttgcagcatgcgctgcccaat
gcgcgcattgtctatgtctcggcgaccggtgccaccacggttcataacctcgcctatgcg
cagcgcctcgggctctggggcggcgacgactttcctttcgccacccgcgcggagttcgtc
gaggcgatcgaggccggaggtgtcgccgcgatggaggtgctggcccgcgatctcaaggcg
ctcgggctctatgcggcgcggtcgctctcgtatgagggagttgaatatcagttggtcgag
caccggctcaccgaggaacagatccgcatctatgacgcctatgcgggcgccttcggcatc
atccacaacaacctcgattccgcgctgcgggcggccaacgtcaccggtaccaccggcacg
ctgaatgcgcaggccaagtcggccgccagatcggcatttgaatccgcaaagcagcgcttc
ttcaaccacctgatcaccgcgatgaaggtgccgtcgctgatcgcgtcggtcgaacgggat
ctgaacgacggccacgccgccgtaatccagatcgtctcgaccggcgaggcgctgatggag
cgccggcttgccgaaatccctaccgaggaatggggcgacgtccaggtcgacatcacgccg
cgggaatatgtgctggattatctggctcactcgttcccgacccagctctatcagcccttc
accgatagcgaaggcaatctgtcgtcgcgcccggtgtttcgggatggccagccggtgcaa
tgccgggacgcggtcggccgacgcgaccggctgatcgagcatctcgcctcgctaccggcg
gtgcacggcgcgctcgaccagatcgtgcagcgttttggcaccgacatggtggcggaggtg
accggacgttcccggcgcatcgtccgcaagaccggctccgatggcgttgatcgtctagtc
gtcgagaaccgcgccggatcggccaatctcggcgaggcgcaggcgttcatggacgacgtc
aaacgcatcctggtgttctcggaggcaggcgggaccgggcgctcctatcatgcagagttg
tcggccaagaaccggcggctgcgggtgcattatctgttggaagtcggatggaaggccgat
gcggcgatccaggggctcggccgcaccaatcgcaccaatcagacgcagccgccgctgttc
cggccgatcgccaccaatgtgaaagcggagaagcgctttctctcgaccattgcgcggcgg
ctcgacacgctcggtgccatcaccaagggccagcgccagaccggcgggcaaggcctgttc
cgcgcagaggacaatcttgaaagccactatgcgcgcgatgccttacggcagctctatctg
ctgctgggcaacggcaagatcgccgattgctcactgcaagcgttcgaggacgccaccggg
ctgaaactgaccgactctaacgggatcagggaccacctgccgccgatcacaaccttcctg
aaccggctgctggcgctgaccatcgctcttcagaacatcctgtttgccgcgttcgagcaa
ttgctgaccgcgcgcgtcgagggcgcgatcgcctcgggcagctatgatgtcggccttgaa
accttgaccgccgagagctttgccgtcaccggccagcagacgatctacacccatcccggc
acctcggccgaaaccagtctgctgacgatcacccagcaggagcgaaaccggccggtcacg
ctcgatgaagcgctgcagcgtctctccgatccgcgcgcgcgccttctggtcaaccgccag
tccggccgcgccgccgtgcaggttccgacccgcagcgtcatgctcgatgacggcgaggtg
gaacgaagggttcgtttgatccggccgatggagcatccgaccctgccgctggcattgatg
ccgcagacccattggcaggaagccgaccgagacacctttgcacgcgcctgggaagcggaa
gtcgctgaggtaccagagttcacctcaagtgagatccacatcgttgccggactattgctc
ccgatctggaagcgcttgccgaacgagtcgacccgggtctatcggcttcagaccgacacc
ggccaacgcatcatcggccgcaaggtgtcacccgcctgggcggcggccgcgaccgatgtg
ggcctgtcgaccatcacccccgacgccgcattcgcggcgttgctcgatggcaagacgatc
attgatctcgctgaatctttgcagcttcggcgtgtccgcgtgatgggtgcaaaccggatc
gagctgaacggcttctccgaggcgatgcgcgaccggctgcgcgcctacggcctgttcagc
gagatcatttcctggaagctgcgcttcttcgtgccggtcgacgcgaccggcccggcggtg
ctggccaaagtgctggagcactatccggtgctccgggtcgccgatcggacggcggcgtga
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