Rhodopseudomonas palustris BisA53: RPE_4191
Help
Entry
RPE_4191 CDS
T00400
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPE_4191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_4191
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPE_4191
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPE_4191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABJ08116
UniProt:
Q07IW8
LinkDB
All DBs
Position
4688622..4691693
Genome browser
AA seq
1023 aa
AA seq
DB search
MAKTPEKPTKPAKTPISKAPNSRASRPDVKPIGPALAELLNPAINRGDAGMGSGTGLQPP
PDNSKDRRSGGEAAIHRARASTAKAEGTATPRPTPLQPFPQPPRAADSGFAEAPQADYVT
PNYNTAATIPTLDPELARQLGLPTEEDDDAALARPPRSKMEGLGVQATAEALENLIREGR
AEFRDESGGVKLWTPHRPPRPEKTEGGVRFVIKSEYEPKGDQPTAIKELVEGINRNDRTQ
VLLGVTGSGKTYTMAKVIEATQRPAIILAPNKTLAAQLYGEFKNFFPDNAVEYFVSYYDY
YQPEAYVPRTDTYIEKDSSINEQIDRMRHAATRALLERDDVIIVASVSCIYGIGSVETYT
AMTFALKKGERIDQRQLIADLVALQYKRTQADFSRGTFRVRGDVIDIFPAHYEDRAWRVN
LFGDTVETIEEFDPLTGHKQDELEFIKIYANSHYVTPRPTLIQAMQSIKSELKMRLDELH
AQGRLLEAQRLEQRTTFDIEMMEATGSCAGIENYSRYLTGRRPGEPPPTLFEYVPDNALV
FADESHVTVPQIGGMFKGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDMMRPQSVAVSAT
PSAWELNESGGVFVEQVIRPTGLIDPPVDIRPARTQVDDLVGEVRATAQKGFRSLVTVLT
KRMAEDLTEYLHEQGVRVRYMHSDIDTIERIEIIRDLRLGAFDALVGINLLREGLDIPEC
ALVAILDADKEGFLRSETSLIQTIGRAARNVEGKVILYADRMTGSMQRAIDETNRRREKQ
VEYNTAHGITPESIKKSIGDILNSVYERDHVLVEIGGHGGAASWSDDAIAIGHNFETVLA
DLETRMREAAADLNFEEAARLRDEVKRLRATELAVVDDPTAKQRTVQGKAGAYAGAKKYG
DAANLPAQSSKRGGNNTPRPSSPSPLRGGSAAKGGRGGGAPGTTSKIHKPDLDEMGIASW
HEVKPSRGKKVERPRKPTLDEMGPGTESKIFQPTSSRDSGPEFGPAPRSTGGAPGHRGGW
KKR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagacacccgaaaagccgaccaagccggcaaaaaccccgatatccaaggcgccg
aattcgagagcgtcgcggcccgacgtgaaaccgatcggcccggcgctggcagaactgctg
aatcccgcgatcaaccgcggcgatgccggcatgggctcgggcaccgggctgcagccgccg
ccggataattccaaggatcgccgctccggcggcgaggccgcgatccatcgcgcgcgggcc
tcgacggcgaaggccgagggcaccgccacgccgcggccgacgccgctgcagccttttccg
cagccgccgcgcgcggccgattccggtttcgccgaagccccccaggccgactacgtcacg
ccgaactacaacaccgccgccaccattccgaccctggatccggaactggcgcggcagctc
gggctgccgaccgaggaggacgacgatgcggcgctggcgcggccgccgcgcagcaagatg
gagggcctcggcgtgcaggccaccgccgaggcgctggaaaatctgattcgcgagggccgc
gccgaattccgcgacgaaagtggcggcgtcaagctgtggacgccgcaccggccgccgcgg
ccggagaagaccgaaggcggcgtgcgcttcgtgatcaaatcggaatacgagccgaagggc
gaccagccgaccgcgatcaaggaactggtcgagggcatcaatcgcaacgaccgcacccag
gtgctgctcggcgtcaccggctccggcaagacctacaccatggccaaggtgatcgaggcg
acgcagcgcccggccattattcttgcgccgaacaagacgctggcggcgcagctctacggc
gagttcaagaacttttttcccgacaacgcggtggaatatttcgtctcctattacgactac
taccagccggaagcctacgtcccgcgcaccgacacctatatcgaaaaggattcctcgatc
aacgagcagatcgaccggatgcgccacgccgccacccgcgcgctcctagagcgcgacgac
gtcatcatcgtcgcctcggtgtcctgcatctacggtatcggctcggtcgagacctatacc
gcgatgaccttcgccttgaagaaaggcgagcgcatcgaccagcggcaattgatcgccgac
ctggtggcgctgcaatacaagcggacgcaagccgatttttcccgcggcacctttcgggtg
cgcggcgacgtcatcgacatcttcccggcgcactacgaggaccgggcgtggcgcgtcaac
ctgttcggcgacaccgtggaaaccatcgaggaattcgacccgctcaccggccacaagcag
gacgaactcgaattcatcaagatctacgccaattcgcactacgtgacgccgcggccgacg
ctgatccaggcgatgcagtcgatcaagagcgagctgaagatgcggctcgacgaactgcac
gcgcaaggccgcttgctggaagcgcagcggctggagcagcgcaccaccttcgatatcgag
atgatggaagcgaccggctcctgcgccggaatcgagaactactcgcgctatctcaccggg
cggcgccccggcgagccgccgccgacgctgttcgaatacgtccccgataacgcgctggta
ttcgccgacgagagccacgtcaccgtgccgcagatcggcggcatgttcaaaggcgatttc
cgccgcaaggcgacgctggcggaatacggttttcggctgccgtcctgcatggataatcgg
ccgctgcggttcgaagaatgggacatgatgcggccgcagtcggtcgcggtgtcggcgacg
ccatcggcgtgggagctgaacgagagtggcggcgtgttcgtcgagcaggtgatccgcccc
accgggctgatcgatccgccggtcgacatccgcccggcgcgcacccaggtcgacgatctg
gtcggcgaagtccgtgccaccgcgcaaaagggattccgcagcctggtgaccgttttgaca
aaacggatggcggaggatttgaccgaatatctgcacgaacagggcgtgcgggtgcgctac
atgcactccgacatcgacaccatcgagcggatcgagatcatccgcgatctgcgcttgggc
gcgttcgacgcgctggtcggcatcaacctgctgcgcgagggcctcgacattccggaatgc
gcgctggtggcgattctggacgccgacaaggaaggttttttgcgcagcgagacctcgctg
atccagacgatcggccgcgccgcgcgaaacgtcgagggcaaggtgatcctctatgccgac
cgcatgaccggctcgatgcagcgcgcgatcgacgagaccaaccgccgccgcgaaaagcag
gtcgagtacaacaccgcccacggcatcacgccggaaagcatcaagaaatcgatcggcgac
atcttgaacagcgtctacgagcgcgaccacgtgctggtcgagatcggcggccacggtggc
gcggcgagctggagcgacgacgccatcgccatcgggcacaatttcgagaccgtgctggcc
gatctcgaaacaaggatgcgcgaggccgcagccgatctgaatttcgaggaggccgcgcgg
ctgcgcgacgaggtgaaacgactgcgcgccaccgaactcgcggtggtcgacgatcccacc
gcgaaacagcgcaccgtgcaaggcaaggccggcgcctatgccggcgccaagaaatacggc
gacgcggcgaatttgccggcgcagtcatcgaagcgcggcggcaacaacacgccgcggcct
tcttcaccctcccccttgcggggagggtcggccgccaaaggcggccggggcgggggtgcc
ccaggcacgacctcgaaaatccacaagcccgacctcgacgaaatgggcatcgcctcctgg
cacgaggtcaagccatcgcgcggcaagaaggtcgagcgcccgcgcaaaccgacgctcgac
gaaatgggccccgggaccgagagcaagatttttcagccgaccagcagccgcgactcaggc
ccggaattcggacccgccccgcgctccaccggcggcgcgccggggcatcgggggggatgg
aagaaacgatga
DBGET
integrated database retrieval system
